Gene Cpin_3894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3894 
Symbol 
ID8360067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4846969 
End bp4847499 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID644966068 
Producthypothetical protein 
Protein accessionYP_003123557 
Protein GI256422904 
COG category 
COG ID 
TIGRFAM ID[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0296482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAGCA ATAAGCTACT GGATAAGAAA CCGCTATCTG TTCCTGACCA GGAACCAGTT 
GATCTGGAGT CTGTGAAGGA GTTCATGAAT GTAGATTTTG ACGAAAAGAA TAACACTATT
TCGTCTCTTA TCATAGCAGC CCGCACATTG TTGGAGGATA AGTATGATAT CGGGATAGTG
AAGAAGCGCC TGCAGGTAGT GGTTGATAAT TCATGTGGAG GGATAGAGTT GCCTGGCTTC
CCTGTTTCGA ATATTTCAGC TGTTGATAAG GACGGAGCTG TAGTTGACCT TAATACGATA
GGTGGTGATG TGGTATATGT AGAGTCCCCG TGCAGTTGTT ACCTGAAGAT CTCTTACGAC
AGTGGATATG AAATAGCGGA CGTGCCGGAA GTGTACAAGA CAGCAATCAA GGAGCAGGTA
ACCTGGATGT TTTCGAATCT GAACGACGTC GAGGTAGCCA AAACCATAGC TCCACTGGCG
GAAGTTAACT TATTACCCTA TCGTAGAAAC GGATTCGGAG TGTTCTTATG A
 
Protein sequence
MCSNKLLDKK PLSVPDQEPV DLESVKEFMN VDFDEKNNTI SSLIIAARTL LEDKYDIGIV 
KKRLQVVVDN SCGGIELPGF PVSNISAVDK DGAVVDLNTI GGDVVYVESP CSCYLKISYD
SGYEIADVPE VYKTAIKEQV TWMFSNLNDV EVAKTIAPLA EVNLLPYRRN GFGVFL