| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3891 |
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| Symbol | |
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| ID | 8360064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4844538 |
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| End bp | 4845287 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966065 |
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| Product | peptidase U35 phage prohead HK97 |
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| Protein accession | YP_003123554 |
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| Protein GI | 256422901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0472754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTCGG CATTAGAGCG GAAGCAATTC AATTTAAAAG CACTTGACGT TGACACTAAG
ACTCGTAGTG TCAAGATAGC TATTGCGGAG CTTGAGAGTG TAGACCGCGA TAATGAAATA
TTCTCCCCTA CAGCATTCGA TAAGACTATA GCTGAACGTG GTCCTAAAGG AACCAATGAG
GTTTGGCACA TGGCCGACCA TGGCTGGTCT CTTAACTCTG CCCTAAGCAA ATTCAAAGAA
CTATATAAAG AAGGCAAGTA CATAGTGGGA ATCTCTGATT ATAGGGATAC GAAGCTATGG
CGTGACACCA TATGGCCGCT ATATGAAGCC GGTGACATCA ACCAGCACTC TGTGGGCTTC
CGTACCGTTA AGTCTATATC CAGTGAAGAC GGTTCGCCAA GAGAAATACT GGAAGTGACC
TTGTGGGAAG GTAGTGCTGT ACTATGGGGC GCAAACCCAT ACACCCCTGT TATGGGTATC
ACCAAATCTG CATTTAAACA GGAAGACGTC GACGACGCTA TTTCCAGATA CGATAAACTC
ATTAAAGCTG TCAAATCCGG TCGATTTGAA GAGGATGATA GCCTACTGAT GCTGGAGCTT
AAACGCCTCC AGCAATTTAC GATTGACCTT TCGAGGATAT CCACTCAGCC GGAACCTGGT
TCCACTGAGC CGGTGAAAGC AAAGGACCTG GTTGAAATGA TTCAACTCGA ATCAGAACTG
AAAAACACAG TCGCAGGACT TTTCAAGTAA
|
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| Protein sequence | MQSALERKQF NLKALDVDTK TRSVKIAIAE LESVDRDNEI FSPTAFDKTI AERGPKGTNE
VWHMADHGWS LNSALSKFKE LYKEGKYIVG ISDYRDTKLW RDTIWPLYEA GDINQHSVGF
RTVKSISSED GSPREILEVT LWEGSAVLWG ANPYTPVMGI TKSAFKQEDV DDAISRYDKL
IKAVKSGRFE EDDSLLMLEL KRLQQFTIDL SRISTQPEPG STEPVKAKDL VEMIQLESEL
KNTVAGLFK
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