| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3890 |
|---|
| Symbol | |
|---|
| ID | 8360063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4843451 |
|---|
| End bp | 4844413 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644966064 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003123553 |
|---|
| Protein GI | 256422900 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0362247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTA AAGAACTGAC AGAGGCATCC CGCGCCTGGG AGCGAAATCA TATCAAGCTG
GAGAAGCGCT GGCAAAAGAA GATAAAACGG GCTATGGATG TTAACCTCAA CAACTTCATT
GACTACGCCC GAAAGAACAG CATTACTTCC GCTGTGAAGG TGATCGATAC CCTAATGGAC
GCAAAGCCAA TTAGCGATGT GCTAAAACAG CTATACTTGT CTGTTGGGAT GGCCCAGGCG
GTGAAAATTA AGAAGGCCGT GGAAGCCGAC AGCAAAAAGT CATTATTTGA CGAGTTCCTT
TCAACGATGG CGGATAGCCT AGCCCAGTTC TTCCTCACCT TTGCTATCAC AGATTTCATA
TACAAGATAT TGGCTTCCCA GAAACGCCGA ACGCTCATTA TACTGAAACA GTTGATGGAA
GAAGCGAACG GAGGCCAGCC GGTATTACCA TCCATTCCTG ATGATTTGAT AACCCCTGAA
CAGTTGATTT CGGAGATAGA GGACCTGGAT AGAGGTCATC AGAAGGAAAT ACAAATACTA
AAGTCGCTGT ATGTAGCCGC CTCTGATCGC GGTACCGGTG CAATTGCTCG GACTGAAGTA
ACCCGTGCAC TCAACTTTGC ATCTTTCACT GCTGCCGGCA ATCTTCCCAT TTATGTTGAT
AAGACATGGA TATGTTGTTT GGACAAGAGG GTAAGAAGAG CACATAAAAA TATTCCATGG
GATCACAGGG AGCCTCATGG GCAAACAGTG CCACTTGAAG AGGCATATAT AGTGTCAGGA
GAGAGACTCA TGTATCCAGC TGATCCAGCT GCGAGTGCTT CTAACGTCAT TGGCTGCCGG
TGCGGACAGA CATTTGCTGC CCGAAGAGAT GCTAATGGTA GAGTAATACG GAAGCCGACA
GGAACCAGTG TAACCGTTAT TCTGCCCAAT AATCAGCCTA CGCTGCCAAC GATAACTATC
TGA
|
|---|
| Protein sequence | MTSKELTEAS RAWERNHIKL EKRWQKKIKR AMDVNLNNFI DYARKNSITS AVKVIDTLMD
AKPISDVLKQ LYLSVGMAQA VKIKKAVEAD SKKSLFDEFL STMADSLAQF FLTFAITDFI
YKILASQKRR TLIILKQLME EANGGQPVLP SIPDDLITPE QLISEIEDLD RGHQKEIQIL
KSLYVAASDR GTGAIARTEV TRALNFASFT AAGNLPIYVD KTWICCLDKR VRRAHKNIPW
DHREPHGQTV PLEEAYIVSG ERLMYPADPA ASASNVIGCR CGQTFAARRD ANGRVIRKPT
GTSVTVILPN NQPTLPTITI
|
|---|
| |