Gene Cpin_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3873 
Symbol 
ID8360046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4831899 
End bp4832276 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content42% 
IMG OID644966047 
Producthypothetical protein 
Protein accessionYP_003123536 
Protein GI256422883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.647087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.150356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAA AAGACAGGTT AATTAAGTTT CTTGAGCAGG AGAATATCAG CCAGGGAAAG 
TTCGAAAAGC ATGTTGGCCT TTCGAATGGG TTTGTTAATA ACATAGGTGC CGGGATAAGT
ACTACTTCTC TGACTAAGAT CAGAAGTAAA TATCCCAGCT TGAATGTTCA ATGGCTATTA
AAAGGTGAGG GGGAGATGTT ACAGAAAAAT ACAGAAGATT TTAACCTTGG GGAAGCAGTT
AAAAAGACGG AGGCAACAGT GGAAGTCATT CTGGCTGCTG TCGCGGAACT ACTGGCGCGA
TCAACTGGTC AATCTTCGAC GATTGTGAAA GAGCAATTGG AAGACCTGGT AAACAAACGG
TTAAACCCTT CCGAATAG
 
Protein sequence
MSVKDRLIKF LEQENISQGK FEKHVGLSNG FVNNIGAGIS TTSLTKIRSK YPSLNVQWLL 
KGEGEMLQKN TEDFNLGEAV KKTEATVEVI LAAVAELLAR STGQSSTIVK EQLEDLVNKR
LNPSE