Gene Cpin_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3848 
Symbol 
ID8360020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4820748 
End bp4821179 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID644966021 
Producthypothetical protein 
Protein accessionYP_003123511 
Protein GI256422858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0110186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.347936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA CCAACTTCAC CGTCCAGCAG CTGAAGTCCA GCAAAGCAGC ATCGCTGAAC 
ATGCAAGTTA TTGATGACCT GGAGAAGCCG CATAAAAACC GTAAGAAGCG GGTACCGAGC
ACGCCGTGTC ACCAGGTATT GTGGATGGGC GGTCAGTTGG CGGCATGGGC TCTGGAAACT
GGGATCATGG TAGAACGTGA ATGGCGATTC CACCCCGTTA GAAAGTGGCG GTTTGATTTT
GCTCTGCCGG ACAAGAAAAT CGGAATTGAG TATGATGGTC TGGTAAGTGC CAAAAGTAGA
CACACAACCC TAGAAGGTTT TACAGGTGAT ACAGATAAGC TGAACGCCGC CCAAGCTTTA
GGGTGGAGGG TGCTAAGATT CACGGTAAAA AACTACAAAA CAGTGATTAT AGAACTTGAA
AAGAACATTT AA
 
Protein sequence
MKRTNFTVQQ LKSSKAASLN MQVIDDLEKP HKNRKKRVPS TPCHQVLWMG GQLAAWALET 
GIMVEREWRF HPVRKWRFDF ALPDKKIGIE YDGLVSAKSR HTTLEGFTGD TDKLNAAQAL
GWRVLRFTVK NYKTVIIELE KNI