Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3831 |
Symbol | |
ID | 8360003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4813616 |
End bp | 4814266 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966004 |
Product | hypothetical protein |
Protein accession | YP_003123494 |
Protein GI | 256422841 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.181238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAGA AACCAATATT ATTTAGCGCT CCGATGGTAC AGGCAATACT AGAAGGAAGA AAGACCGTGA CCAGGAGAAT AATTAAGCCA AGGACGCCAG AAGATATTAC GCGTCTCATG TATATGGAAG AAGGAATACG ACCAGAAGAA ATGAAGGAAG AGCATATCAG GTGCTCTTGC CCATATGGCA GGATTGGTGA TATTCTCTGG GTGCGGGAGT CTTTCAATAA GACGCCGGAC TTCGGATATG CATATAATGC CTCTCAAACT AATATGGGCG AAGAGGTGCG ACAGGAATAC CTAAAAGCTG GTCAAAAGTG GGCGAAATGG AAGCCTTCAA TACACATGCC ATACGATGCC TGCCGTTTGT TTCTGAAGAT CACTGACATC CGGGTAGAAC GCCTGCAGGA TATTACTGAG GATCAGGCGA AGGCAGAAGG CATTGAACCA CTGCTTATGT CAGGCGCGCA AAAGGCAGAG TGTGGTCAAT TATACAGAGA CTATACAAAG AAGCCTGGCT TATTTAATGA GGGGCTGCGG CCAATAGAAT CATTCCGTTC ATTATGGATA TCCATCAATG GCGAGGATAA CTATAATGCC AACCCCTTCG TCTGGGCTGT ATCATTTGAG AGAACAGAAA AACCACAATA A
|
Protein sequence | MNKKPILFSA PMVQAILEGR KTVTRRIIKP RTPEDITRLM YMEEGIRPEE MKEEHIRCSC PYGRIGDILW VRESFNKTPD FGYAYNASQT NMGEEVRQEY LKAGQKWAKW KPSIHMPYDA CRLFLKITDI RVERLQDITE DQAKAEGIEP LLMSGAQKAE CGQLYRDYTK KPGLFNEGLR PIESFRSLWI SINGEDNYNA NPFVWAVSFE RTEKPQ
|
| |