Gene Cpin_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3826 
Symbol 
ID8359998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4811065 
End bp4811427 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content43% 
IMG OID644965999 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_003123489 
Protein GI256422836 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.950929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGAAG CTTTGGAAGT TCTTGAAGAA AAAAATCTTG GCGCACTCGT AGTTGTGGAC 
GAAAGTGAAA AATTGATTGG CATATTCACT GAACGGGATT ACGCACGCAA AGTCGTCCTG
AAGGGTCGGT CCTCAAAGGA AACTTATGTA AGGGACATCA TGACGGATAG TCCGGTATTT
GTTTCTCCTG ACACTGACAT TGAATATTGC ATGCAATTGA TGACGAATAA GTTCATCCGC
CATCTCCCCG TTATTGAAAA CAATGAACTG ACCGGCATTA TCTCCATCGG TGACATCGTG
AAGCATGTCA TCAGCAACAA AGACTTCATC ATTCAACACC TGGAACATTA CATCGTAAGC
TAA
 
Protein sequence
MYEALEVLEE KNLGALVVVD ESEKLIGIFT ERDYARKVVL KGRSSKETYV RDIMTDSPVF 
VSPDTDIEYC MQLMTNKFIR HLPVIENNEL TGIISIGDIV KHVISNKDFI IQHLEHYIVS