| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3804 |
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| Symbol | |
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| ID | 8359976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4782596 |
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| End bp | 4783501 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644965977 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123467 |
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| Protein GI | 256422814 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.476681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0667593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCC GGTCGGAAAG CTTGGGACAA TTCTATCAAC ATAAATTCAA CGCTGAAGAT
ATCTCAACAG CGCCTGTTTA TAACAGTTTT AATGTTTTTT CTATTGAAGA CCGGATACTT
TCCGGAACTT CATCCCCTTC ATTCGTGAGA AGAGATTTTT ATAAAATCAT GTTGTTCCGT
GGGGAAAATG TATTTCATTT CGCGGACAAG AGCGTGACTG TTTCAGGGAA TACATTACTT
TTTTTTAATC CCCAGGTGCC TTACACCTAC GATGCTTTAT CAACAAACAC CAGTGGGTAC
TTCTGTGTCT TTCGCGAAGA GTTTTTTAAT GATGCGATAA AATTTCCTGT TCGCAATAAC
CCACTTTTTA TGGCGGATGC AAAACCAATA TATTCATTAT CTGCTGAACA TTCAAAACAG
GTAGCTGACC TGTTTATAAA GATGTCAGAA GAATTAAATG CTGAATTTGA TTATAAATAC
GATCTGATCA GGAGCTACGT CCTGGAATTG ATCTTTTTTG CATTAAAGCT GGAAAATTCA
TCACAGCAGG ATATCAGAAG CAATGCCTCC TTCCGGATTG CCCGCGTCTT TAAGGAGCTG
CTTGAACGAC AGTTTCCTAT AGCATCCCCC TCACAGAGAT TTACACTAAG ATCACCCCAG
AAATTTGCCG ATGCCCTTTC TATCCATACA AACTACCTGA ACAGAGCTGT CAAAAAAGCG
ACAGGCAAAA CTACCACTGA ACATATTTTT GAACGCCTGA TAAGCGAAGC AAAAATTCTC
CTTCGTCATT CAGACTGGAG TATTGCAGAA ATCAGCTTTG CATTAGGATT TGAAGATCCT
GCTCATTTTA ATCATTTCTT CAAAAAACAA ACGCAGGTCA CTCCTACCGC ATTCAGGTCA
GTTTGA
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| Protein sequence | MKSRSESLGQ FYQHKFNAED ISTAPVYNSF NVFSIEDRIL SGTSSPSFVR RDFYKIMLFR
GENVFHFADK SVTVSGNTLL FFNPQVPYTY DALSTNTSGY FCVFREEFFN DAIKFPVRNN
PLFMADAKPI YSLSAEHSKQ VADLFIKMSE ELNAEFDYKY DLIRSYVLEL IFFALKLENS
SQQDIRSNAS FRIARVFKEL LERQFPIASP SQRFTLRSPQ KFADALSIHT NYLNRAVKKA
TGKTTTEHIF ERLISEAKIL LRHSDWSIAE ISFALGFEDP AHFNHFFKKQ TQVTPTAFRS
V
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