Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3792 |
Symbol | |
ID | 8359962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4769395 |
End bp | 4769772 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965963 |
Product | Carbohydrate-binding family V/XII |
Protein accession | YP_003123455 |
Protein GI | 256422802 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.156874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0203537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTCA AAATGCCAAT TATCGCATAT GCGATTGCTA CATCACTATT CTCGCCACAC AGCTTTACAG TATCACCCGA AAGTAAACCG ATAGAAGCCT ATCACACCAC TAGTCCGGTC AACGCACTTA ATAACAAAAC GCCCGAATGG ATCTCCTGGC AGACCTATTA TAGCGGCTTT AATTTACTTT CTCCCAAAAC TGATATCGGC CCCTGCGACA CTGCGTCCGA ATGGGTCTCA GCAACTGCTT ATGCAGGTGG TAGTTATGTG AAATACAATG GAAAACTATT CCGTGCAAGA AACTGGACGC AGGGAGATAC GCCACGCGGA TTTGGTATCT GGCCTGATGG TCCCTGGGAA GATTTAGGGT ATTGCTAA
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Protein sequence | MPLKMPIIAY AIATSLFSPH SFTVSPESKP IEAYHTTSPV NALNNKTPEW ISWQTYYSGF NLLSPKTDIG PCDTASEWVS ATAYAGGSYV KYNGKLFRAR NWTQGDTPRG FGIWPDGPWE DLGYC
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