Gene Cpin_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3792 
Symbol 
ID8359962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4769395 
End bp4769772 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content47% 
IMG OID644965963 
ProductCarbohydrate-binding family V/XII 
Protein accessionYP_003123455 
Protein GI256422802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.156874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0203537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCA AAATGCCAAT TATCGCATAT GCGATTGCTA CATCACTATT CTCGCCACAC 
AGCTTTACAG TATCACCCGA AAGTAAACCG ATAGAAGCCT ATCACACCAC TAGTCCGGTC
AACGCACTTA ATAACAAAAC GCCCGAATGG ATCTCCTGGC AGACCTATTA TAGCGGCTTT
AATTTACTTT CTCCCAAAAC TGATATCGGC CCCTGCGACA CTGCGTCCGA ATGGGTCTCA
GCAACTGCTT ATGCAGGTGG TAGTTATGTG AAATACAATG GAAAACTATT CCGTGCAAGA
AACTGGACGC AGGGAGATAC GCCACGCGGA TTTGGTATCT GGCCTGATGG TCCCTGGGAA
GATTTAGGGT ATTGCTAA
 
Protein sequence
MPLKMPIIAY AIATSLFSPH SFTVSPESKP IEAYHTTSPV NALNNKTPEW ISWQTYYSGF 
NLLSPKTDIG PCDTASEWVS ATAYAGGSYV KYNGKLFRAR NWTQGDTPRG FGIWPDGPWE
DLGYC