| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3789 |
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| Symbol | |
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| ID | 8359959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4766798 |
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| End bp | 4767853 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644965960 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003123452 |
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| Protein GI | 256422799 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.938742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0445947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA AATATCTCCC GCACTTACTT TTTTGGATTG TTAACATTGC TTTGATCACC
CTGATATTTG GTGCTCAATT GCATGGACAT TACCTGATTG CTTTGCCGGC AGTACTGATG
GTGGTTCCTG TACACGCGTT TTATTTCTAT GGATTGTCCT ATTACATTAT TCCCCGATAT
TTTTTTCGGC ACCAGTTTGT CCGCTTATTC TTTGCATGTC TGATTTGTAC GGTACTTGCG
ACCTTATTGT TCCGCGCGGT AGACATCCTT TTTGTGGATC CATTTTTTCA AGCAGTGAGT
GATAATCCGG CGAACGATTT CAGGTGGCAT GTTGCGCAGG GAAGGTTTAT AGACAGGCTT
TTTCAACCGG CGGACATAGC ATCTGCGTTT ATCGGTAGCA ATTCGGTGGT CTGGATAGGC
GTGTCGATTA AGTTTATTAA AATGTGGTAT GAGAAGCGGG ATGCAGCTAC CCAGGCAGAG
TTGAATTTTC TCAAAAGCCA GATACATCCG CATTTTCTGT TTAATACGCT CAATAATCTC
TATGCATTGT CGCTGACTCA ATCTGCACAA ACGCCGGATG TGATATTGGG TTTATCTAAG
ATCCTCCGTT ATATGCTATA TGAATGCAAT ACGGCATTGG TATCGTTGCG GAAAGATATT
GAGATACTCA ATAGTTATAT TGCGTTAGAA AAGATCCGGT ATGAAGAAAG GTTGGAACTT
AATGTTAACG TACATCTGGA TGATGGCATG CAACAAATAG CTCCGTTATT ATTACTGCCA
CTGGTGGAAA ATGCTTTCAA GCATGGCGTG AGCGAGACGG AAGAGTGTCC CTGGATTAAT
ATTGAATTAA AGACGAAGGG GGATAAGCTG ACTTTCAATG TATCCAACAG TAAACCGGAG
ACAGCCCCGG AAAAACCTGC TATGCATTAT TCGAAGATCG GGCTGGCCAA TGTGCGTAAA
AGGCTTGAAC TGTTATATCC CGGACGCCAT GTACTGCAGG CATATGATGA AGAAGATTGT
TTTATTTCAA TACTGGAAAT TGAATTGACT GATTAA
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| Protein sequence | MKAKYLPHLL FWIVNIALIT LIFGAQLHGH YLIALPAVLM VVPVHAFYFY GLSYYIIPRY
FFRHQFVRLF FACLICTVLA TLLFRAVDIL FVDPFFQAVS DNPANDFRWH VAQGRFIDRL
FQPADIASAF IGSNSVVWIG VSIKFIKMWY EKRDAATQAE LNFLKSQIHP HFLFNTLNNL
YALSLTQSAQ TPDVILGLSK ILRYMLYECN TALVSLRKDI EILNSYIALE KIRYEERLEL
NVNVHLDDGM QQIAPLLLLP LVENAFKHGV SETEECPWIN IELKTKGDKL TFNVSNSKPE
TAPEKPAMHY SKIGLANVRK RLELLYPGRH VLQAYDEEDC FISILEIELT D
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