Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3784 |
Symbol | |
ID | 8359953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4761453 |
End bp | 4762295 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965954 |
Product | protein of unknown function DUF303 acetylesterase putative |
Protein accession | YP_003123447 |
Protein GI | 256422794 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0139497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0146207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAGCAT CTTTTTTATT GATCGGACAA TCGAATATGG CCGGACGTGG TTATAGTCAG GAGGTACCAG CTATTATTAA TGAGGGTATC AAAGTGCTCC GGAATGGACG GTGGCAGCTG ATGTCAGAGC CTATCCATAA TGACCGGTCC AGTGCCGGAA TAGGTCTGGC GGGTAGTTTT GGCGCTGCCT GGCGTATGGA TCATCCAGAT GTGGAAATCG GTTTTATACC TTGTGCGGAC GGCGGCACCA GTCTGGATGA CTGGTCAGTT GGCGGTCCGC TGTTTGATCA TGCATTATCG CAGGCGAAGC TGGCACAGCG TAGCAGTACT TTGGCAGGCA TACTATGGCA CCAGGGCGAA AGTGATTGTT TCCCTGAAAA GGCGGCGGAG TATGAGCGTA AGCTGAAGGT AATTATAGAT ACTTTACGAC AGGAATTGCG TGCTGCTGAC GTGCCCCTTA TTGTTGGCGG ATTGGGCGAT TTCCTGACCA GTGGTATGTA TGGAAAGTAT TTTGGAGCTT ATCCGCTGGT TAATGAGGCA TTGTTACACT ATACACAGAC AGCACCGCTT TCTTATTTTG CGACAGCAGA AGGGTTAACC AGTAATCCGG ATGGATTACA TTTCAATGCT ACATCCTTAC GTATACTGGG GGTAAGGTAT TATGCCGCCT TCCGCAGGCG GGCATCTGTT ACAAGTCCTT TAGCGGAAGA AAGTAAGATC CTGGAAGATA TTTATAACAG GGCTCATACG CGTAAGGAGC GGCTCTTTCA ACTGGAGCAT CGTTTTGCGA CGGGGAAGAT AGATGTAGCG CAGTTTCAGC ATGAGTCGAG TAGTATACAA TAG
|
Protein sequence | MIASFLLIGQ SNMAGRGYSQ EVPAIINEGI KVLRNGRWQL MSEPIHNDRS SAGIGLAGSF GAAWRMDHPD VEIGFIPCAD GGTSLDDWSV GGPLFDHALS QAKLAQRSST LAGILWHQGE SDCFPEKAAE YERKLKVIID TLRQELRAAD VPLIVGGLGD FLTSGMYGKY FGAYPLVNEA LLHYTQTAPL SYFATAEGLT SNPDGLHFNA TSLRILGVRY YAAFRRRASV TSPLAEESKI LEDIYNRAHT RKERLFQLEH RFATGKIDVA QFQHESSSIQ
|
| |