| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3777 |
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| Symbol | |
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| ID | 8359946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4753083 |
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| End bp | 4755218 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965947 |
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| Product | Cytochrome-c oxidase |
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| Protein accession | YP_003123440 |
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| Protein GI | 256422787 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000584965 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0167995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC ATTGGTTAAA GCGAATACTG TTAACAGCAG CGGTGTTAAT GGTGAGTATA
TATTGTGCGC AGGCGCAGGT AAAGGGAAAA GCTTTCTTTT CACTGGACTC CGCAGCCGGC
TTATTGACAT GCTGTTTAAT ACTGCTGGCG GTAATACTGC AATTAGCATT GTATATGAAG
TATCGTTTGC AGAGTGTGTT CAGGTTCCGT AAAGTAAGAC GTCAGCAATC TTCACATGAA
AGCATTACGG GGCATGTCAG CCAATTGAAC CGTCATCAGC TGGGGGTATT GCTGCAGCTT
AAACAGCGGA CTAAAATTAA TATGCTGGTA TTGGTTGCGC TGGGATGTAG TCTGTCTAGC
CAGGCGCAGG ATCTTAAACC GACTAAATTA ATGAATCAGA CAGGTATTCT GATCACCATC
ATATTGATAT TAATTCCGGT GCTGGTCGGC ATAGCGTTGA TGATTTTCAA ACTGAGGAGG
GTGATTGATA ATTACCGCCG TAAAGTATAC CGGGAGGACG CCGGCCAGCT GGCGGCTTAT
CTGGAAAACC TGCATGATTC GGAGATGCTG GATGAATTAT CACAACGTAA AACAGCGCTC
GATTATTCAT TGAATCATGA AGAACTGGCA GGGACGCAAG CTGCCGATGA TCACAAAGGT
TTGTTGAGTG AAGTCAGTAA TGAAAATAGC ATCAATTTCA TTACACGTAA AAAAGCGTCG
GCAGCACGTC CGCCTGTTGA TCCTGCATTG GGGAAACTGG TATGCTGGTT TCTGGGTACT
GCCACCTTCT GGCTTTTGTT TGGGACAACA GTCGGTGAGT ATGTCGGGAT AAAATTTATC
AGTCCTGACG TAGATCATGT AAGCTGGCTG AGTTTTGGCA GATTGCGGCC GGTACATACC
AATGCTGTTT TCTGGGGATG GGCATCACTG GCCATGCTGG GCTTGGGTTA TTATGTTGTT
CCGAGAGTTA GTAATACGTC AATTGCCAGT CTGAAGAAAG GATGGTATAC GCTTATCCTT
GTAAACGCTG CTGTCGTATC GGGTTCCATC TGCCTGATGG CAGGCATCAA TAATGCGGGA
GGAGAATACA GGGAATACAT ATGGCCGGTG ATGGCATTGT TTGCCGGCGG TTTGTGTATT
ACGCTTGTGA ACTTCCTGCA GACGATTGCC AGAAGGACGT CCAGGGAAAT TTATATATCT
AACTGGTACA TTGTTTCAGC AGTCATATTT GCGATCGTCA TTGTATTGGT GGCATATTTA
CCTTTCTGGC AGGACGGTCT CGGAGAAACG ATTATTCAGG GGTATTATAT GCATCAGGGC
GTGGGCATGT GGTTTATGCT CTTTATGTTA GGTGTTACTT ATTACTTCCT GCCACAGCAG
CTCAATCGTC CTATCTATTC TTATAGTCTG GGTATACTGG CTTTCTGGTC ACAGATTATT
TTCTATACGG TGATCGGTAC GCATCATTTT GTGTTCAGTT CTATTCCCTG GTGGCTGCAG
ACAGTCGCAA TTGTTGGCAG TGCCGGTATG CTGATTCCGG TAACGTCAGG GAGTACTAAC
TTTTTCATGA CTTTCCGTAA GGAATGGCAT AAACTGGCCA GTAGTTATAC ACTTCCTTTC
TTCCTGGTGG GCCTGGTGTT TTATTTCACC GGCTCTATGC AGGGCACTGC GGAAGCATTC
CGTTATACCA ACCTGATATG GCATTTTACA GACTTTACAG TAGCGCATTC GCACATTACA
ATGTATGGTA TTATCACGTT TTTGCTGTGG GCGGCTATCT ATACGGTTGT GCCTAGATTA
ACCGGCAAAG AACCACCCCA GGTGGCTGTA GGTATTCATT TCTGGATGGC GCTGATCGGA
CTGTTATTCT ATACTGTTCC CTTGATGTAT GGCGCTACAT ACAGGGGGAT CATGTGGCAA
TCCGGTAAAC CATTTATAGA TAGTGTGGTA TTTATGGCGC CGTACTGGCT ATGGCGCGCA
ATAGGCGGCA GCCTTATGTG GACCGCACAC CTTGTGTTTG CCTACAACAT GTATAAGATG
TTGCAGGCAA GTGCCGCCCC CGATATAAAA GACGCCGCTT TGAAAAAATT AAGTGAGCAG
TATTTAAATG GCTCCATTTC ATTTCCGATT CAATAA
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| Protein sequence | MKQHWLKRIL LTAAVLMVSI YCAQAQVKGK AFFSLDSAAG LLTCCLILLA VILQLALYMK
YRLQSVFRFR KVRRQQSSHE SITGHVSQLN RHQLGVLLQL KQRTKINMLV LVALGCSLSS
QAQDLKPTKL MNQTGILITI ILILIPVLVG IALMIFKLRR VIDNYRRKVY REDAGQLAAY
LENLHDSEML DELSQRKTAL DYSLNHEELA GTQAADDHKG LLSEVSNENS INFITRKKAS
AARPPVDPAL GKLVCWFLGT ATFWLLFGTT VGEYVGIKFI SPDVDHVSWL SFGRLRPVHT
NAVFWGWASL AMLGLGYYVV PRVSNTSIAS LKKGWYTLIL VNAAVVSGSI CLMAGINNAG
GEYREYIWPV MALFAGGLCI TLVNFLQTIA RRTSREIYIS NWYIVSAVIF AIVIVLVAYL
PFWQDGLGET IIQGYYMHQG VGMWFMLFML GVTYYFLPQQ LNRPIYSYSL GILAFWSQII
FYTVIGTHHF VFSSIPWWLQ TVAIVGSAGM LIPVTSGSTN FFMTFRKEWH KLASSYTLPF
FLVGLVFYFT GSMQGTAEAF RYTNLIWHFT DFTVAHSHIT MYGIITFLLW AAIYTVVPRL
TGKEPPQVAV GIHFWMALIG LLFYTVPLMY GATYRGIMWQ SGKPFIDSVV FMAPYWLWRA
IGGSLMWTAH LVFAYNMYKM LQASAAPDIK DAALKKLSEQ YLNGSISFPI Q
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