Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3768 |
Symbol | |
ID | 8359936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4746150 |
End bp | 4747004 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965937 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_003123431 |
Protein GI | 256422778 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0315517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAG ACACAGCTAA AGTTTTGCAG AAAAGGAAAA AACAGATTCT CGAATTGTGG ATGAAGAACC AATTAGTGGA TTTTTCTCTA CGGGAAGACC TTATGTCGAA CGACGAACTC AGCGTACAAT CAGAAGAACT TGTAGACGTT TTACTACAAG CTTTAAGCAG TTCTAGTCTG GATGATGTAC AATCAAACGC TCTGGAACCT GTCTATGAAG TACTGGAAGG TATTTCTATT TCCCGGGCTA AACAGGGTTA TTCTCCGAGA GAAACAGGCA CTTTTGTGTT CAGCCTGAAA GACGCATTAT TATCCGTTCT GCAACAGGAA ATCAAAAATG ACCCTATTCA GTTGCTGGAC GAAAGCCTGA AGGTCAGCAA ACTGATCGAC AGCCTCGGCA TCGTTACATT TGAAACGTTT ATTAAAGGAA GAGAAGAAGT GATTCTGCGT CAAACCGACG AGATAGCCGA AATCTCCACC CCCGTTATCC GTGTATGGGA CGGCATTGTT GCCATGCCTA TTATCGGCAC CCTGGACAGC TCCCGTACCC AGGTCGTAAT GGAGAACCTC TTACAGGAAA TAGTAGATAC ATCCAGCAGC ATCGCCATCC TGGATATCTC CGGCGTTCCT GCCGTTGATT CCCTCGTTGC ACAACACCTT ATTAAAACTG TCAGCGCGAC GCGCCTGATG GGAGCGGAAT GCATTATCAG CGGTATTCGA CCTGAAATCG CTCAGACAGT CGTTCACCTG GGTATCGACC TGTCTGGTAT CGTTACCAAA GCTACACTGG CAAGCGCCCT AAGATATGCA TATTCGCTTT TACAGTTAGA AGTAAGAAAA GTAGTTGCAA AGTAA
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Protein sequence | MKLDTAKVLQ KRKKQILELW MKNQLVDFSL REDLMSNDEL SVQSEELVDV LLQALSSSSL DDVQSNALEP VYEVLEGISI SRAKQGYSPR ETGTFVFSLK DALLSVLQQE IKNDPIQLLD ESLKVSKLID SLGIVTFETF IKGREEVILR QTDEIAEIST PVIRVWDGIV AMPIIGTLDS SRTQVVMENL LQEIVDTSSS IAILDISGVP AVDSLVAQHL IKTVSATRLM GAECIISGIR PEIAQTVVHL GIDLSGIVTK ATLASALRYA YSLLQLEVRK VVAK
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