Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3764 |
Symbol | |
ID | 8359932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4742707 |
End bp | 4744323 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965933 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003123427 |
Protein GI | 256422774 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.180542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0415669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAA TAACCCGGAT CACGCTCGAT ACTGATATGG ACCTGGTGCT GGTGCACAAG CGTACAATGA AACTGGGTGA ACTGGCCGGC CTCTCTCTGG CCTCTCAGAC CACCTTTGCT ACAGCTGCCT CTGAAGTAGC CAGACATGTC ATTGAATATG GACACAACGC AGTATTGATA CTAGGCATCC GTGCCGATAT CAAAGATTCG GAGAAATTCC TGATAGCGAA AGTACTGGAC CGCAATATCA ACCTTACCGA AAAGATCAAT GAAAACCTGG TCTATGCCAA ACGACTAGTA GATCATTTTA CACTGGACCG GACGGACAAA AGCATTGAGA TTACGCTGGA ATTCAGAATC CCCGGCGCAC ATAAGATAAT TGGTAGCCGC ATAGAACAAT GGATCTCTTC TTTTAGTGTC GAACAACCTG TATCACCTTA TGATGAAATT AAACGTAAGA ACAAACAATT ACAGGAACTG GCCGAAAAGC TGAAAGCAAG CGAAACACAA TACAGAGATG TTACCAATGC CTTACCATTG ATCATCTTCT CTGTAAACCA GGAGGGCGAA TTATTGTATG CTAACAGCTG GCTGAAAACA TTAACCGGCT ACGAAGCCAC CGAACTAAAT GAGAACAAAT GGAAACCGGT TCTTAGAGAA CAGGAATTCA CATTTGCCTG GGAAAACTGG TGGCAGCATG TAACAGAAGG GACCTCCTTC AAGCGTGAAC TTGAGTTAAA AAACATACTG ACCGGCGACT TCATCTGGCA CCTGGTCACC GTTATGCCAG TAACAGACGA AACAGGTGAA GTCACATACT GGACCGGTTC CATAGTAGAT ATCCATGCAC AAAAGGTCAT GGAACAAACA CTGAGAGACA ACAAGGAGCT GAAAGAAATG AAACTGCTGC TGGAAGAAAA AGTAGGTGAA CTGAATCGCA GCAACCAGGA ACTCGAACAA TTCGCATACG CGGCATCTCA CGACCTCCAG GAACCATTAA GAAAAATCGT TTACTACAGC GACTATCTGA ATAAGCACTA TTCAGAACAA ATCGATGAAC GTGGTAAACT TTACTTCGGA AACATGATGA GCGCTAGTCA GCGAATGACA CAGCTGATCC ACGATCTGCT GAATTTCTCG CGTATATACC GCGAAAATCT GCACCTGGTA AAAACAGATC TGAATGCACT GGCCACTGAA GCAATGAACG ACCTGGATCT CGCTATCAAA ACCAAACATG CACAGATAGA AGTAAGCCAG CTACCTGTCA TCTCCGTTTA TCCGATGCAG ATGCGGCAGT TGTTCCAGAA CCTGTTGTCA AATGCGATCA AGTTCTCAGA TGAAAAACGA GCGCCCTGCG TGAAAGTATA TGCAGAGGCA AACGGCAAAG ATGTGCAGCT GATTTTTGAA GATAACGGGG TTGGTTTCGA AGAAAAATAC CTGGATAAAA TGTTCAGCTT ATTTCAACGC CTGCATTCGC GTGAGAAATA CGCTGGCACA GGCATAGGGC TCGCCATATG CAAGAAGATA GCCGACTTGC ACAATGGTAC CATTACGGCC AGCAGTCAGC CTGGAAATGG TGCAAAATTT ATATTGACCC TGCCCTCGGT TGCGTAA
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Protein sequence | MQEITRITLD TDMDLVLVHK RTMKLGELAG LSLASQTTFA TAASEVARHV IEYGHNAVLI LGIRADIKDS EKFLIAKVLD RNINLTEKIN ENLVYAKRLV DHFTLDRTDK SIEITLEFRI PGAHKIIGSR IEQWISSFSV EQPVSPYDEI KRKNKQLQEL AEKLKASETQ YRDVTNALPL IIFSVNQEGE LLYANSWLKT LTGYEATELN ENKWKPVLRE QEFTFAWENW WQHVTEGTSF KRELELKNIL TGDFIWHLVT VMPVTDETGE VTYWTGSIVD IHAQKVMEQT LRDNKELKEM KLLLEEKVGE LNRSNQELEQ FAYAASHDLQ EPLRKIVYYS DYLNKHYSEQ IDERGKLYFG NMMSASQRMT QLIHDLLNFS RIYRENLHLV KTDLNALATE AMNDLDLAIK TKHAQIEVSQ LPVISVYPMQ MRQLFQNLLS NAIKFSDEKR APCVKVYAEA NGKDVQLIFE DNGVGFEEKY LDKMFSLFQR LHSREKYAGT GIGLAICKKI ADLHNGTITA SSQPGNGAKF ILTLPSVA
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