| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3760 |
|---|
| Symbol | |
|---|
| ID | 8359928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4739741 |
|---|
| End bp | 4740481 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644965929 |
|---|
| Product | Electron transfer flavoprotein alpha/beta- subunit |
|---|
| Protein accession | YP_003123423 |
|---|
| Protein GI | 256422770 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0674596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00129982 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT TAGTTTGTAT CAGTAAAACT CCGGACACGA CTGCAAAAAT AGCTTTCACA
GACAACAACA CGAAATTCAA TGAAGCGGGT GTACAATTCA TCATCAACCC CTACGATGAA
TGGTATGCCC TTGTTCGTGC GCTTGAATTG AAAGAAACGC TGGGCGCAAC CGTTCATCTG
GTAACCGCAG GCGGCGCAGA TACGGAGCCG ATTATCCGTA AAGCACTGGC GTTAGGAGGA
GACGAAGCTT TCCGTATTAA TACTGATAGT CAGGACAGCT TTTACATTGC TTCACAAATA
GCAGACCATG CCCGTAAACA GGGGTATGAC CTGATTTTCA CAGGAAAAGA AACCATCGAT
TACAACGGTG CAGCTATCGG CGGCATGGTA GCCGAACTGC TGGATCTTCC CTATGTCTCT
ATTGCTGCAA AATTTGAACT GAATGGTACC GAAGCGGCCA TCCACCGTGA AATAGAAGGC
GGAGAAGAAA TCGTAAAAGT AACACTCCCG GTAGTCGTAT CCTGTCAGAA AGGAATGGCA
GAACAGCGTA TTCCCGGTAT GCGCGGAATC ATGGCTGCCC GTACCAAACC ATTGGCAGTA
GTAGAACCCG CAGCAGCTGA TGCGTTGACC ACCATAACCA GTTTTGAACT CCCCCCTGCA
AAAGCAGGCG TAAAGCTTAT CAGTCCCGAC AATGTAGAAG AGCTGGTAAA ATTGCTGCAT
GAAGAAGCAA AAGTGATCTG A
|
|---|
| Protein sequence | MKILVCISKT PDTTAKIAFT DNNTKFNEAG VQFIINPYDE WYALVRALEL KETLGATVHL
VTAGGADTEP IIRKALALGG DEAFRINTDS QDSFYIASQI ADHARKQGYD LIFTGKETID
YNGAAIGGMV AELLDLPYVS IAAKFELNGT EAAIHREIEG GEEIVKVTLP VVVSCQKGMA
EQRIPGMRGI MAARTKPLAV VEPAAADALT TITSFELPPA KAGVKLISPD NVEELVKLLH
EEAKVI
|
|---|
| |