Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3754 |
Symbol | |
ID | 8359922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4723532 |
End bp | 4723876 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644965923 |
Product | ribosomal protein L20 |
Protein accession | YP_003123417 |
Protein GI | 256422764 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00129982 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCGTT CAGTAAATGC TGTTGCTTCC AGGGCCCGCA GGAAGAAAAT ATTAAAGCAG GCCAAAGGCT TCTACGGTAA ACGTAAAAAT GTCTATACCG TAGCGAAAAA CGTATTGGAG AAAGGTCTTA CGTATAGCTA CGTAGGTCGC AAACTCAAGA AAAGAAATTA CCGTCAGCTG TGGATCGCTC GTATCAACGC TGCAGTTCGC GCTGAAGGAA TCACTTATTC TGAGTTTATC CATAAATTGT CAGTTAAGAA TATCGGCCTG AACAGGAAGG TATTAGCTGA TCTGGCAATG AATGAACCAG AAACTTTCAA AAATCTGGTT GCTTCCGTTA AGTAA
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Protein sequence | MPRSVNAVAS RARRKKILKQ AKGFYGKRKN VYTVAKNVLE KGLTYSYVGR KLKKRNYRQL WIARINAAVR AEGITYSEFI HKLSVKNIGL NRKVLADLAM NEPETFKNLV ASVK
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