Gene Cpin_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3746 
Symbol 
ID8359914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4709936 
End bp4711246 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content48% 
IMG OID644965915 
Producthypothetical protein 
Protein accessionYP_003123409 
Protein GI256422756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0760284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0101141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTATA ACAGACTATA TATTATACTG CTGGCATTCC TCTTTGCCGC ATGTTCGAAG 
GATAAAACCG AATCGCTTTT CGGAGAGAAA CCGGAAGAAC GTTTGGAGGA AGCCATGAAA
GAATACAAGG CCACATTAAC AGGAAGTGCC TACGGATGGA AAACAGGTGT CTATCCTGCC
GCCGGTGGCG GATACGCCTT CTATTTTAAG TTCGGCGCCA ATGACCGGGT CACCATGTAC
AGTGACGTTA CACCGGATGC AGCCAGTCAG GGACTGGAAA GTACGTACCG CCTGAAAGCA
GTTCAGCGTC CATCCCTACT ATTTGATACC TATTCCTACC TGCACCTGCT CTCCGATCCT
GATCCGAATG TCTACGGCGG AGCAACCGGA CAGGGTTATG CGATCGATTT TGAGTACAGT
ATAGATGCCG TTTCTGCGGA TACCATCAAA CTGACGGGTA TCGCCAACAA CACCAGAATG
GTGATGGTAA AAGCGACACA GGCGGAAGCA GAAGCGTATG CAGCAGGTGA CTTCGTTTCG
CTGATTGACA ACATGCAAAG CTACATGGCG CAAAATCCGT GGTTGTATCT CGAATTCAGC
GATGGGCGCA AATTACAGGT AAGTGTGAAC TCCTTTGCCA AAAACTTTAC CCTGATCTAC
ATCGATGATG CCGGGCAGGT ACAGCTGTTA TCCACCGGAT ACTATTATAC ATTAAACGGA
CTCTATCTGA AGAACCCGAT CACGTACAAC GGCAATACAT TCCATGAACT CTTCTGGGAT
CCGGTGAAAG AAGTCTTCTA TGTTACTGTA AATGGTCAAC GGGTAGAAGT AAAAGTCTCT
CCCAGCTCTG TCGTGCCGGC ACACAGGTTA CTGGGCATTG ACTTTGCTTC CCTGATCGTT
CCGCCACAGG CATTACCGGG ATGGTCGGCC GACTTCACGA CGATCTATAC CACTGCGGCG
AATGCTATTC GTACAGGCCC TTACCGCCTG ACTCTGTATT ATACAGAGTT TGCCTTTGAC
GTGACACAGG GTATCATGAA CGTGGATGTC TACGTCATTC AGAACAACAA CTTGTACCTG
GCACAGTATC CGTTCACCTA TACGAAGACA AATGCCGGGG TATTCAAATT CACCGGACAA
ACCTTCAGGG GCAATGCCGG CCTGATTGCC ACGGAGATGA AACCTTTGCT GGACTATATC
CGGAATGACC GCTTTACCAT GGATTTCCTG GTAGACAGTC AGGAAGGTAA ACTGGCCCAG
TTAAAAAGTG TAGAGCATCC TACCTTCTTT TTCTCGGGAT ATCCGCAATA A
 
Protein sequence
MLYNRLYIIL LAFLFAACSK DKTESLFGEK PEERLEEAMK EYKATLTGSA YGWKTGVYPA 
AGGGYAFYFK FGANDRVTMY SDVTPDAASQ GLESTYRLKA VQRPSLLFDT YSYLHLLSDP
DPNVYGGATG QGYAIDFEYS IDAVSADTIK LTGIANNTRM VMVKATQAEA EAYAAGDFVS
LIDNMQSYMA QNPWLYLEFS DGRKLQVSVN SFAKNFTLIY IDDAGQVQLL STGYYYTLNG
LYLKNPITYN GNTFHELFWD PVKEVFYVTV NGQRVEVKVS PSSVVPAHRL LGIDFASLIV
PPQALPGWSA DFTTIYTTAA NAIRTGPYRL TLYYTEFAFD VTQGIMNVDV YVIQNNNLYL
AQYPFTYTKT NAGVFKFTGQ TFRGNAGLIA TEMKPLLDYI RNDRFTMDFL VDSQEGKLAQ
LKSVEHPTFF FSGYPQ