| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3736 |
|---|
| Symbol | |
|---|
| ID | 8359904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4696169 |
|---|
| End bp | 4697209 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644965905 |
|---|
| Product | Rhodanese domain protein |
|---|
| Protein accession | YP_003123399 |
|---|
| Protein GI | 256422746 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.571798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0306844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAC ACAACAGAGT TTCTGCGGCT GAACTGAAGG TTCGGCTGGC GGCTGAAACA
TTTCGCCGCA CTACTATCTC CTTTTATCAG TACGCAAAGA TCGAAGATCC CACCGCCTTC
CGTAATGAAT TGTACGAACG TCTTTTTACT TTAGGCGTAT TCGGTCGTAT CTACGTCGCC
CATGAGGGTA TCAATGCACA GATCAGCGTT CCCGAATACA ATGTTGACGC TTTCAGAGAT
GTGCTTTATT CTTATTCTTT CCTGAATGGT ATCCGCCTGA ACATCGCTGT TGATGATGAC
GGGAAGTCTT TCTGGGTACT CAAAATTAAG GTGCGTGAAA AGATCGTAGC CGATGGTATT
GAGGATCCGA CTTTCGATAT CACGAACAGG GGTAAATACC TGGACGCTAA AGGCTTTAAC
GAGCTGACGG AGGATCCTGA TACCATTGTG GTGGATATGC GTAATCACTA CGAATATGAA
GTAGGGCATT TTCAGAATGC GATAGAAGTA CCTTCTGATA CTTTCCGTGA GCAGCTGCCG
ATGGCTGTTG ACATGCTGAA AGACCAGAAA GACAAGAATA TCGTGATGTA CTGTACAGGT
GGTATCCGCT GTGAGAAGGC GTCTGCCTAT ATGCTGCATA ACGGTTTCAA GAATGTGTTT
CACCTGGAAG GAGGTATTAT TGAATATACC AATAAGGCCA AAGAACAGGG ATTACCGCTG
AAGTTCAAAG GAAAGAACTT CGTGTTTGAC GATCGCCTGG GAGAACGTAT AACCGATGAA
GTGATCAGTA AGTGTCACCA GTGTGGTAAA CCTTCAGATA CGCATACCAA CTGTGCAAAT
GATGCCTGTC ACCTGTTATT TATACAATGT GAGGAATGTG CAGCGGCTTA TGAAGGTACC
TGTAGCACTG ATTGTAAGAG TGTGCTGCAT ATGCCGGAAG AGGAGCGCGA TGAACTGAGG
AGAGGAGTTG ACAAGGGACA GATGATCTTC AACAAATCGA AACAACGCCT GCGTCCAAGA
CTGGAACGCG AAAACGATTG A
|
|---|
| Protein sequence | MALHNRVSAA ELKVRLAAET FRRTTISFYQ YAKIEDPTAF RNELYERLFT LGVFGRIYVA
HEGINAQISV PEYNVDAFRD VLYSYSFLNG IRLNIAVDDD GKSFWVLKIK VREKIVADGI
EDPTFDITNR GKYLDAKGFN ELTEDPDTIV VDMRNHYEYE VGHFQNAIEV PSDTFREQLP
MAVDMLKDQK DKNIVMYCTG GIRCEKASAY MLHNGFKNVF HLEGGIIEYT NKAKEQGLPL
KFKGKNFVFD DRLGERITDE VISKCHQCGK PSDTHTNCAN DACHLLFIQC EECAAAYEGT
CSTDCKSVLH MPEEERDELR RGVDKGQMIF NKSKQRLRPR LEREND
|
|---|
| |