| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3728 |
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| Symbol | |
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| ID | 8359896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4686958 |
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| End bp | 4688259 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965897 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003123391 |
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| Protein GI | 256422738 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0602217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0956817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTA AGGACGCGCG CATAGCCATG TTCTGCCGGA TACTTCTCTG CTGTGTCCTG
TTATTGACCA TAAAATCGTC AGTACAGGCC CAGGATACCC TGCACATTAC CCTCCAGGAC
GCAGAAAAAC AGTTTCTTGA AAAGAACCTG CAACTGCTGG CGGAGAAATA CAATGTATCC
ATCGCACAGG CGGAAATTAT CCAGGCGAAA CTTTATAACA ATCCTAATCT TACCCTCAGC
GGTAACCTTT ACAATCCGGA TAGAAAGAAA TTCTTCGATG TCAGTAACCA GTACGGCCAG
TACGAAGTGG GCATCCAGCA GCTGATATCG CTCGCCGGTA AAAGAAATAA ACAGGTGCAG
CTGGCACGTA CCGACGCCAG CATGGCGGAA AACGCCTTTT TCGATCTGCT GCGCACCCTG
CGTTTCACGC TCCGCAGTAA TTTCTACCAG GCCTACTATC TGCAAAACTC CATGAAAGCC
TATGAAGAAC AGATCTCTTC CCTGGCAAAA ATGGACGCTA CTTATAAAGA CCTGCAACAG
AAAGGACTCG TGACGCTGAA AGACGCCGTA AGACTACGCT CTTTATTATA CAGTCTGCGG
GCCGACCGTA CCAGTATGCA GAACCAGCTC AATGACCTGC AATCGGAAAT ACAACTGCTG
CTGCAAAACA ACCACGCATG GTTTGTATTA GATATGCCGG AAGATGCCAT AACAGGTATT
CCGGAGATCA GGCAGACCAG CCTGCAGAGC CTTGTAGATA GCGCTTATGC CAACAGGCAG
GACCTGCAAC TCGCACAGAA CAACCTTCGT TATAACCAGC AGAACTATAA CCTGCAAAAA
GCCATGGCAG TACCCGATCT CACACTGGGC GCCAACTTTG ATAAACGCGG TAGCTTCGTG
GACAATGCAA CCTTCCTGAA TGTCGGTATC GACCTTCCTT TCTTCAACCG TAACCAGGTC
AATATCAAGG CTGCCAGATA CAGCATGGAC CAGACCAAAC TACTGGTACA ACAACAGACA
CAGGCTGTAG AAAATGAAGT GCAGACGGCA TATGCGAAAG CCATCAATAC AGATAAAATG
CTGGAAACAG TCGATCCGGA ATTCCGTGGT CAGTTTGAGC AATTACTGCA GGCCATCACA
GATAATTTCC TAAAAAAGAA TATCAGTCTG CTTGAACTGA CTGACTTTTA CGATTCCTAT
AAGGAAAATA TGCTCCAGCT CAACCAGCTG CAGAATGCCC GGATGCAGGC AATAGAAACG
CTCAACTTCG CAGTGGGCAA AACCTTGTTC AATAACAAAT AA
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| Protein sequence | MSSKDARIAM FCRILLCCVL LLTIKSSVQA QDTLHITLQD AEKQFLEKNL QLLAEKYNVS
IAQAEIIQAK LYNNPNLTLS GNLYNPDRKK FFDVSNQYGQ YEVGIQQLIS LAGKRNKQVQ
LARTDASMAE NAFFDLLRTL RFTLRSNFYQ AYYLQNSMKA YEEQISSLAK MDATYKDLQQ
KGLVTLKDAV RLRSLLYSLR ADRTSMQNQL NDLQSEIQLL LQNNHAWFVL DMPEDAITGI
PEIRQTSLQS LVDSAYANRQ DLQLAQNNLR YNQQNYNLQK AMAVPDLTLG ANFDKRGSFV
DNATFLNVGI DLPFFNRNQV NIKAARYSMD QTKLLVQQQT QAVENEVQTA YAKAINTDKM
LETVDPEFRG QFEQLLQAIT DNFLKKNISL LELTDFYDSY KENMLQLNQL QNARMQAIET
LNFAVGKTLF NNK
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