| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3727 |
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| Symbol | |
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| ID | 8359895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4685863 |
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| End bp | 4686942 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965896 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003123390 |
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| Protein GI | 256422737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00335506 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0890337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTT TCGCAATATA TCTTCTGCCA CTCGCCTTTG CAGGTATGCT GTCTGCCTGC
GGCGCTCATC ACACAGAGAG CAAAAAAGAC GAACCGGCCG TATCTGATAG TCTGATTAAA
AACGTGGAAA CAGCCGCGGC AAAAATGGAA GAACCTTCAG AGTCTATTAA ACTGAACGGT
AAAATCCAAC CGGATGAAAG CAAACAGTCA AAAGTGTTTG CACTCGTCAG TGGTAAAATA
AAAAGTGTAC AGGTAGAACT GGGCGACTAT GTAAAACAGG GTCAGGTACT GGCCGTATTA
CAGAGTGCAG AAGTAGCCGG TATCACCAAC GATGTATCGA TCGCAGAATC CAGTCTGGAG
ATGGCGAAAA AGAACGTCGA AACACAAAAG TCCCTCTTTG AAGGAAACCT CGCTACACAA
CAGGATTATC TCTCTGCACA GATAGAATAC AAAAAAGCAC AGTCAGAACT GAACAGGGCC
CATCAGGTAG CCAGCATCAG CGGTGGCAAC AGCGCGGCTT ATACGCTGAA AGCACCGATC
AGCGGTTATG TGATCGAGAA AAACATCACC GGCAACTCTG AAGTACGTCA GGATAACAGC
AACAGTCTCT TCACTGTTGC AGATCTGTCT ACCGTATGGA TCATTGCAAA TGTATATGAG
TCTGATATTG CTAATATCCG TTTAGGCGAT GAAGTGAGAG TAAAAACGCT GGCAAATCCG
GAGAAAGAAT ACCTGGGTAA AATAGATAAA GTATACAACG TACTGGACCC GGCCAATCGT
ACCATGCAGG TACGTATCAG TATGCCGAAT GCGAACGGCG AACTGAAACC GGAGATGTTT
GCGACTGTTA AAGTAAGCGC CAAACCTACC GGCGCTGTGC TCAGCATTCC TGCAAAGGCC
ATCGTGATGG ACAACAGCAA ACAGTATGTA GTAGTAAGGA AAACAAACAA GCTGGAGATA
AAGCAAATCA GCCTGTTGCG TAGAATTGAA GATCGTGCAT TCATTTCCGG TCTGGAAGAA
GGCGACCAGG TGGTTACCTC CGCACAGGTC TTTATCTACG ATGCTCTTAA CATTAAATAA
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| Protein sequence | MKSFAIYLLP LAFAGMLSAC GAHHTESKKD EPAVSDSLIK NVETAAAKME EPSESIKLNG
KIQPDESKQS KVFALVSGKI KSVQVELGDY VKQGQVLAVL QSAEVAGITN DVSIAESSLE
MAKKNVETQK SLFEGNLATQ QDYLSAQIEY KKAQSELNRA HQVASISGGN SAAYTLKAPI
SGYVIEKNIT GNSEVRQDNS NSLFTVADLS TVWIIANVYE SDIANIRLGD EVRVKTLANP
EKEYLGKIDK VYNVLDPANR TMQVRISMPN ANGELKPEMF ATVKVSAKPT GAVLSIPAKA
IVMDNSKQYV VVRKTNKLEI KQISLLRRIE DRAFISGLEE GDQVVTSAQV FIYDALNIK
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