| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3726 |
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| Symbol | |
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| ID | 8359894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4682726 |
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| End bp | 4685848 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965895 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003123389 |
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| Protein GI | 256422736 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0290592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.111264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGC TAATAAAGTC AGTCATTGCC TTTTCTCTGA AGAATCGGCT CTTCATAGGT
TTTGCCACAC TCCTGCTCAT TATATGGGGT GTGATCGCAT TTAGAAATAT TCCTATTGAA
GCATTCCCGG ATGTAACAAA TACACAGATC ACTATTATCA CCCAATGGCC CGGCAGAAGC
GCCGAAGAGG TGGAAAAATT TGTAACGGCG CCTATCGAGA TAGCCATGAA CCCGGTACAG
AAAAAGACCT CTGTACGTTC AACCACGGTG TTCGGACTAT CTGTTGTGAA AGTGATCTTT
GATGATAATG TCGATGATGC ATTCGCGCGT CAGCAGGTAA ATAACCTCTT ACGTGATATC
GAACTGCCGG ATGGCGCAGA CCCTGACGTA CAGCCGCCTA CCGGTCCGAC GGGTGAAATC
TTCAGGTATA CGCTGGACAG CAAAACAAAG ACGGTAAAAG AACTGAAAAC ATTGCAGGAC
TGGGTTATCG AACGCCGCCT GTTAAATGTA CCTGGTGTCG GTGACGTCGT GAGTTTTGGC
GGTGAAGTGA AGACCTATGA GATCACCGTA AATCCGCAGA AACTGGCGTC TTATGATATC
ACGCCACTTG ATGTGTACAA CGCTATTTCA AAGAGTAATA TCAATGTGGG CGGCGATGTG
ATCGTCGACA ATTCACAGGC ATATGTGGTA CGTGGTATCG GCTTGCTGAA CAACGCAGAA
GAAATCGGTA ATATCATTGT TGATAATATC AATAACACGC CGATCCTGGT AAAAGATATC
GCACAGGTAG AGGTATCTGC CCTTCCGCGA CTCGGACAGG TAGGCCGTGA CAAACAGAAC
GACGTTGTAG AAGGGATCAT CGTAATGCGT AAGGGAGAAA ACCCGAGCGA GGTGATCAAA
CGTGTAGAAG ACCGCATTAA TTATCTGAAT GAAAAGGTAT TGCCTGCAGA TGTGAAAATC
AACACGTTCT ACAACCGTAA CAACCTGATC GAATTCGCTA CACATACCGT ACTGCATAAC
ATGCTGGAAG GTATCATCTT CGTAACGGTG ATCGTCTTCA TCTTTATGGC GGATTGGCGT
ACTACCGTAA TCGTAGCGAT CGTAATACCA TTGGCACTCT TATTTGCATT CATCTGTCTG
ACGCTGAAAG GCATGTCAGC CAACCTGCTG TCGATGGGGG CGATAGATTT CGGTATCATC
ATTGATGGCG CCGTCGTGAT GGTCGAGGGG ATCTTTGTAC TGCTCGATCA TAAGCAACAT
CAGATGGGCA TGGAACGGTT TAACAAACTG TCCAAACTGG GCCTGATCAA ACAGACAGGC
GGAGAACTCG GTAAAGCGAT CTTCTTCTCC AAACTGATCA TCATTGCCGG TTTACTGCCG
ATCTTCTCTT TTGAAAAAGT AGAAGGTAAA ATGTTCTCTC CGCTGGCCTG GACATTAGGT
TTTGCGTTAC TGGGCGCACT GCTGCTGACA CTGACGCTGA TACCGCTGCT GAGTAGCCTC
CTGCTGAAGA AGAACGTACG TGAGAAACAC AACGTATTCG TGGAAGCCAT CACCAATGGC
GTCATGAAAA TGTTCTCCCG CACTTACCGT CACAAACGTA TGACGCTGCT TGTCTCAACG
GCACTTGTAG TAGTTGGGTT ATTCAGCTTT AAATTTCTGG GATCTGAGTT CCTTCCGGAA
CTGGATGAAG GAGCGATTTA TATCCGTGCG ACTTGTCCGC TGAGTGTATC GCTGGACGAA
TCAAAAACAC TGGCGAATAA AATGCGCCGT ATCATCCTGG CTTTCCCGGA AGTGAAACAG
GTGATGTCGC AAACCGGCCG TCCAAACGAC GGAACAGATG CTACCGGATT CTATAACATT
GAATTCCACG TAGATATTTA TCCGAAGAGT GAATGGAAGA GCGGGTTGAC AAAAGAGGAA
CTGATTGATA AGATGCAGGA ACAGCTGGCC GTCTACCCTG GGGTAAACCT GAACTTCTCA
CAGCCGATCA TGGATAACGT GGAAGAAGCC GTATCCGGGG TAAAAGGATC GCTTTGCGTG
AAGATCTATG GCGACAGCCT GACCTACACA GAAGCCCGCG CAAACGAGGT CTATGACATC
ATGAAGGACA TTCCGGGTGT CACTGACCTG GGCGTGATCA AAAATATCGG GCAGCCTGAG
ATGAGAATTG ACCTTGATGA AAATAAAATG GCCCTTTATG GCGTTACTAC TGCAGACGCG
AATGCGATCA TAGAAATGGC GATCGGGGGT AAGGCCATTA CACAGATATA TGAAGGAGAG
CGTAAATTCC AGTTACGGCT ACGCTATGAA GAGAAATACC GCAACACAGC AGAAGTAATC
AGTAATCTGA TGGTTCCTAC CCTTCGCGGT GCACGGGTGC CGATTAAGAA CATCGCCACT
ATCCGTACAC TGACCGGTCC GAGTATTATT TTCCGCGACG ACAACAGGCG TTATACTGCC
GTTAAGTTCT CCATCCGTGG CCGTGACATG GGTAGCGTGA TAGCAGAGGC ACAAGATAAG
GTAGATAAAA CGGTAAAGCT GGATAAAGGC TATGAGATGC AATGGGCGGG CGACTTTGAA
AATCAGCAAC GTGCCACCAA ACGGCTGACG CAGGTAGTAC CTATCAGTCT GATGATTATC
TTCCTGATCC TGTTTGTGAT GTTCGGTAAT GTGAAGGACG CCGGTCTGGT ATTGATCAAC
GTACCATTTG CCATTATCGG GGGCATTGCC GCCCTGCTTA TATCGGGGAC TAACTTCAGC
ATATCGGCAG GTATCGGTTT TATCGCATTG TTCGGTATCT GTATACAGAA TGGGGTGATC
CTGATATCGG TATTTAAGAA TAATATGCAG TCGGTCAAAC GACATGAATT TAATAAACAT
ACACTGGAAA TAGCCATAAG AGACGGGGTA CGTACGAGAA TACGTCCGGT GGTAATGACG
GCATTGATGG CTGCAATAGG ACTCTTACCA GCAGCACTGT CCAAGGGAAT TGGTTCTGAG
ACTTCCAAAC CATTGGCCAT CGTAGTAATT GGCGGCTTGA TCACTGCCAC TATACTCACG
CTGCTGGTAT TCCCACTGTT CTTCTACCTG GGTTACAGGA AAATGGGACA GAAACTGGAT
TAG
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| Protein sequence | MQKLIKSVIA FSLKNRLFIG FATLLLIIWG VIAFRNIPIE AFPDVTNTQI TIITQWPGRS
AEEVEKFVTA PIEIAMNPVQ KKTSVRSTTV FGLSVVKVIF DDNVDDAFAR QQVNNLLRDI
ELPDGADPDV QPPTGPTGEI FRYTLDSKTK TVKELKTLQD WVIERRLLNV PGVGDVVSFG
GEVKTYEITV NPQKLASYDI TPLDVYNAIS KSNINVGGDV IVDNSQAYVV RGIGLLNNAE
EIGNIIVDNI NNTPILVKDI AQVEVSALPR LGQVGRDKQN DVVEGIIVMR KGENPSEVIK
RVEDRINYLN EKVLPADVKI NTFYNRNNLI EFATHTVLHN MLEGIIFVTV IVFIFMADWR
TTVIVAIVIP LALLFAFICL TLKGMSANLL SMGAIDFGII IDGAVVMVEG IFVLLDHKQH
QMGMERFNKL SKLGLIKQTG GELGKAIFFS KLIIIAGLLP IFSFEKVEGK MFSPLAWTLG
FALLGALLLT LTLIPLLSSL LLKKNVREKH NVFVEAITNG VMKMFSRTYR HKRMTLLVST
ALVVVGLFSF KFLGSEFLPE LDEGAIYIRA TCPLSVSLDE SKTLANKMRR IILAFPEVKQ
VMSQTGRPND GTDATGFYNI EFHVDIYPKS EWKSGLTKEE LIDKMQEQLA VYPGVNLNFS
QPIMDNVEEA VSGVKGSLCV KIYGDSLTYT EARANEVYDI MKDIPGVTDL GVIKNIGQPE
MRIDLDENKM ALYGVTTADA NAIIEMAIGG KAITQIYEGE RKFQLRLRYE EKYRNTAEVI
SNLMVPTLRG ARVPIKNIAT IRTLTGPSII FRDDNRRYTA VKFSIRGRDM GSVIAEAQDK
VDKTVKLDKG YEMQWAGDFE NQQRATKRLT QVVPISLMII FLILFVMFGN VKDAGLVLIN
VPFAIIGGIA ALLISGTNFS ISAGIGFIAL FGICIQNGVI LISVFKNNMQ SVKRHEFNKH
TLEIAIRDGV RTRIRPVVMT ALMAAIGLLP AALSKGIGSE TSKPLAIVVI GGLITATILT
LLVFPLFFYL GYRKMGQKLD
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