Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3722 |
Symbol | |
ID | 8359890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4676108 |
End bp | 4677211 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965891 |
Product | GTP-binding protein YchF |
Protein accession | YP_003123385 |
Protein GI | 256422732 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0380878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0334593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTAC AAGTAGGAAT TGTTGGATTA CCAAATGTGG GAAAGTCGAC ATTATTTAAT GCGGTGAGCA ACAGCGCAAA AGCGCAGGCG AGCAATTATC GTTTTTGCAC AATTGAACCT AACGTAGGAC TTGTAGACGT ACCGGACGAG CGTCTGGCAA AGCTGGAAGA ACTTGTAAAA CCGGAACGCG TAGTTCCTAC TACTATTGAA TTCGTAGATA TCGCAGGCCT TGTAAAAGGT GCGAGCAAGG GCGAAGGTCT TGGTAACAAG TTCCTCGCTA ATATCCGTGA GGTAGACGCC ATCGTGCATG TGATCCGTTG TTTCGAGGAT GAAAACATCC TGAGAGAAGA AGGTGCCATC AATCCTGTCG GCGATAAAGA GATCATCGAT ACTGAATTGC AGCTGAAAGA CCTGGAGAGC GTTGAAAAGA AAATCGCGCG TACCGAGAAA ATGGCTAAAA CAGGTGGTGA TCCGAAAGCA AAAGTAGAAT TCGAAATCCT GAAGAGATGT CAGGCGCATC TGGAACAGGG TAAAAATGTT CGCGAACTGG GTCTGAGCAA AGAAGAGCGC GTAGCCATCG CGGATCTGTT CCTGCTGACA GAAAAACCAG TACTGTATGT GGCCAATGTG GATGAAGCAT CTATGCTGAC CGGTAACAAA TTCTCTGTAC AGCTGCAGGA ATCTGTAAAA GCAGAAAACG CAACGGTTGT AGTGATGAAC AACAGTATCG AAGCCCAGAT CTCCGAAATG GAAGACGCAG CTGATAAAGA ACTGTTCCTC TCCGAATATA ATCTGACAGA ACCAGGTCTT AACCGCCTGA TCCGTTCTGC TTATAGCCTG CTGAACCTGA TCACTTATTT CACCGCTGGT GTACAGGAAG TGAGAGCATG GACCATCCAC ACAGGTTGGA AAGCGCCACA GGCTGCAAGT GTGATCCACA CTGATTTCGA AAAAGGTTTT ATCAAAGCTG AGGTGATCGC TTATTCGGAC TATGTAAAAT ATGGTTCAGA ATCAGCCTGC CGCGATAACG GCCGTTTACG TATAGAAGGT AAAGAATACG TTGTGAGCGA TGGTGATGTA ATGCACTTCC GTTTCAACGT TTAA
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Protein sequence | MALQVGIVGL PNVGKSTLFN AVSNSAKAQA SNYRFCTIEP NVGLVDVPDE RLAKLEELVK PERVVPTTIE FVDIAGLVKG ASKGEGLGNK FLANIREVDA IVHVIRCFED ENILREEGAI NPVGDKEIID TELQLKDLES VEKKIARTEK MAKTGGDPKA KVEFEILKRC QAHLEQGKNV RELGLSKEER VAIADLFLLT EKPVLYVANV DEASMLTGNK FSVQLQESVK AENATVVVMN NSIEAQISEM EDAADKELFL SEYNLTEPGL NRLIRSAYSL LNLITYFTAG VQEVRAWTIH TGWKAPQAAS VIHTDFEKGF IKAEVIAYSD YVKYGSESAC RDNGRLRIEG KEYVVSDGDV MHFRFNV
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