Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3720 |
Symbol | |
ID | 8359888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4673401 |
End bp | 4674651 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965889 |
Product | hypothetical protein |
Protein accession | YP_003123383 |
Protein GI | 256422730 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0117489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0352204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAAGA AAACGCTGCA CGAAGATTGG ATTGCTGTAA TTATTGCATT TCTGACTATT GGCCTGGTGC TATTCGGCCT CAAACCCGTC CTTCCGAAAA TTGCGGTATG GAACGACGCT TCATTTATTA CCGCACAGTT TGCGGGTGTT GAAATCTGGA AACAAACCGG TATTTTATTC CTGTGGGTAT TGGGCAGTTT ACTGCTGGCC AAATCTTTCA CCGGCAAGGT AGAGGTAACA AAACTCTTCC TATCTCTCCT GTTCATCATC TTTGTGACAT TGCTGGCACA GTTTATCGCC AGTTATAAAA CACTGAAGGA TTTCGGGATA GAAGTGGTAT TATTCAGCCT TATCCTCGGA TTGCTGATCA GCAACCTGGT GGGAGTACCT GCGATACTGA AACCCGCTAT TCAGACAGAA TTATATATAA AAATCGGACT GGTGTTGCTG GGCGCCAATG TCTTGTTTGA CGATATTATT AAAGCCGGCG GACTAGGTAT CCTGCAGTCC GTAGCAGTTG TATTTACCGT CTGGTACTTC AGTTTCTGGG TCTGCCGGAA GCTTAAACTG GATGATGAAT TCAGAATGAT GATATCCAGC GCAGTATCTA TCTGCGGAGT ATCAGCGGCC ATCGCCACCG CAGGTGCGAT TGAAGGAGAC AATAAGAAAC TCTCACACGT CATTTCCCTG GTACTGATCG TAGCTATCCC GATGATGCTG TTCATGCCGT ATATCGCCAC CTGGGCACAT ATGCCGCCGG CAGTAGCAGG CGCCTGGCTC GGAGGCACGA TCGATACTTC CGGCGCAGTA GTGGCCGCGG GTACGATGCT GGGAGAAGAA GCCCTGAAAT ATGCGACGCT GGTGAAGTTC TCACAGAACG TATTACTCGG ACTCGCCGCT TTCTTTATTT CCCTTTACTG GTCGTACAGC CGTAAAGAAG CTGGTTATGA AAAGCCTACC CTGCGTACCA TCTGGGAGCG TTTCCCGAAG TTTGTACTCG GATTTATAGG CGCATCCCTC CTGTTTTCCT TCCTTCTCCC GGCGGAATCT GTAGCTGCTG CGAAAGGTCC TTTAAAAGAA TTGCAAACAT ATTGGTTCGC AATAGCGTTT ACCTGTATAG GACTGGAGAC TAAATTCACC GATATCTTTA AGATGGAGAA TGGTCGTCCC GCAATGGCCT TTATCATTGC CCAGGCCTTT AACATCATAT TTACACTGGT GATAGCCTAC CTGGTATTCG GAAGATCATA A
|
Protein sequence | MPKKTLHEDW IAVIIAFLTI GLVLFGLKPV LPKIAVWNDA SFITAQFAGV EIWKQTGILF LWVLGSLLLA KSFTGKVEVT KLFLSLLFII FVTLLAQFIA SYKTLKDFGI EVVLFSLILG LLISNLVGVP AILKPAIQTE LYIKIGLVLL GANVLFDDII KAGGLGILQS VAVVFTVWYF SFWVCRKLKL DDEFRMMISS AVSICGVSAA IATAGAIEGD NKKLSHVISL VLIVAIPMML FMPYIATWAH MPPAVAGAWL GGTIDTSGAV VAAGTMLGEE ALKYATLVKF SQNVLLGLAA FFISLYWSYS RKEAGYEKPT LRTIWERFPK FVLGFIGASL LFSFLLPAES VAAAKGPLKE LQTYWFAIAF TCIGLETKFT DIFKMENGRP AMAFIIAQAF NIIFTLVIAY LVFGRS
|
| |