Gene Cpin_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3717 
Symbol 
ID8359885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4670216 
End bp4671751 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content47% 
IMG OID644965886 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003123380 
Protein GI256422727 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.904376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0271118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAA AACACATTCC CGAAACAATT GACATCAGGC AACTGACTCC CGAAGACTAT 
CTCGACCTGA AAGAATCCAT GGTATCGGCT TATGCAGATA TGGAAGGCAG CTACTGGCGG
GAGCCTACTA TCCGCAGACT GGTAGAGCTG TTCCCGGAAG GACAGATTGC CGTTACCGTG
AATGATAAAG TGGTTGGCTG TGCGCTTTCT ATTATCGTTG ATTATGGAAA ATTTGGCGAC
GAACATACCT ACGAACAGAT CACTGGATAT TACACGTTCA GTACACACGA TCGTAAAGGT
GACGTACTAT ATGGCATAGA AGTGTTTGTG CATCCTGATT ATCGTGGCAG GAGACTGGCC
CGCCGCTTAT ATGATGCCCG CAAGACCCTC TGTGAACGCC TTAATCTGCG TGGTATCGTG
GCAGGTGGAC GTATTCCTAA CTACCTCAGG TATGCAGAAG AAATGTCGCC CAGGGACTAT
ATCGAAAAGG TACGTGACAA AGAGATCTAT GATCCTACAC TCACCTTTCA GTTCTCCAAC
GATTTCCAGG TAAAAAAGAT CCTTAAGAAC TACCTGCCGC ATGACGAGTC TTCCATGGGC
TTTGCCACGC TGCTGCAATG GTATAATATC TATTACGAGA AGGATCAGGA TACGATCAGA
TACAACAAAT CTACCGTGCG TATCGGACTC GTGCAATGGC AGATGCGGGA TTATGGCGGA
CTGGATGGCT TCCTGCAGCA GGTGGAATAT TTTATCGACG CCGTCAGCGA TTACGGATCT
GATTTCGTCG TATTCCCCGA ACTGTTCAAT GCCCCTTTAA TGGCGGAATT CAATCAGATG
GATGGTGCAG CTGCAATCAG GGGAGTAGCC CAGTATACGG AGCAACTACG GGACCAGTTT
ATCAAACACG CAGTGTCCTA CAACGTGAAT ATCATTTCCG GCAGTATGCC GATCATCATC
GGAGATTCGC TGTATAATAT CTGTTATCTC TGCCGCCGGG ACGGTACACA CGACTACTAT
ATCAAAATGC ATCCGACGCC AAGTGAAGTA TATGCCTGGG GGATTAAAGG CGGAGATCAG
CTGAAGATCT TTGATACAGA TTGTGGCAAA ATCGGTATTC AGATCTGTTA TGATGTGGAA
TTTCCCGAGC CTTCACGTAT ACTGGCAGAG CAGGGAATGC AAATATTGTT TGTACCTTTC
CTGACAGATA CCCAACATGC CTTCAATCGG GTGCGCTTCT GCGCACAGGC CAGGGCGATT
GAAAATGAGT GCTATGTAGC AATGGCCGGT TGTGTGGGCA ATTTACCCAA GGTCAATAAC
ATGGACCTGC AGTATGCACA GAGTGCCGTG CTGACGCCTT CTGACTTTGC CTTTCCGGTA
ACCGGCGTTA AAGCAGATGC TACTGCCAAT ACAGAAATGG TGGTCATCGC CGATGTTGAC
CTGGTACTGT TGAAAGAATT GAGTGCTTTT GGCAGCGTAC AGACGAAGAA GGACATGAGA
AGGGATCTTT ATGAAGTTAA GTGGAAGAAA CGTTAA
 
Protein sequence
MTSKHIPETI DIRQLTPEDY LDLKESMVSA YADMEGSYWR EPTIRRLVEL FPEGQIAVTV 
NDKVVGCALS IIVDYGKFGD EHTYEQITGY YTFSTHDRKG DVLYGIEVFV HPDYRGRRLA
RRLYDARKTL CERLNLRGIV AGGRIPNYLR YAEEMSPRDY IEKVRDKEIY DPTLTFQFSN
DFQVKKILKN YLPHDESSMG FATLLQWYNI YYEKDQDTIR YNKSTVRIGL VQWQMRDYGG
LDGFLQQVEY FIDAVSDYGS DFVVFPELFN APLMAEFNQM DGAAAIRGVA QYTEQLRDQF
IKHAVSYNVN IISGSMPIII GDSLYNICYL CRRDGTHDYY IKMHPTPSEV YAWGIKGGDQ
LKIFDTDCGK IGIQICYDVE FPEPSRILAE QGMQILFVPF LTDTQHAFNR VRFCAQARAI
ENECYVAMAG CVGNLPKVNN MDLQYAQSAV LTPSDFAFPV TGVKADATAN TEMVVIADVD
LVLLKELSAF GSVQTKKDMR RDLYEVKWKK R