| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3713 |
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| Symbol | |
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| ID | 8359881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4660944 |
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| End bp | 4662281 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965882 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003123376 |
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| Protein GI | 256422723 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.336357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0558632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTTA AATTATTATC GGTAATTAAC AACAGGCATT TTCACTCCTT ATTAGGTAAC
CTCGTCTCTG CTTTTCTTAA CGTATTATCC TTTGCGATTC TCGTTCGTTT ACTGTCTCTT
TCTGCTTTTG GGGAATGGGT TTTATTCATC GGGACATATA CTGTGCTGGA CCAGATCCGT
ACCGCTTTAT TACAATCCGG CATTATTAAA TTCTATACCG GCTCGGATGA GAAGACTGGT
AAGGAAGTGG CCGGAAGTGC CTGGTACCTT GTGCTTATAC TGACCGGCAT TTATCTGCTC
CTCAATCTGA TCGTAGGTGT CGCGTTATAC GGACAATTTG ATGAAACATG GCGCTTTTTT
ATACGCTGGC TGGGTGTCAT GATGGTCGTA TCAGTACCCT TTAACGTTGC CAGCTGGTTC
CTCCAGGCAG AACATCGCTT TGATAAGATA TTACAGGTCC GTTTCTGGCA GAACGGCGGC
TTCCTGGTAT TAATACTCGC CTTCCACTTC TTCAGTACGG TTACGCTGCC GCATGTACTT
TTCGCCTATA TGGCCGGACT AGCGGCTACC AGCTGTTTTA CCCTGATAAA AGGCTGGACG
AAAGTCCGCC AGGTAGTACA CAGCACTAAA AAACAAGTAC TCGTACTCGT GAAATACGGA
TGGCTGATCG TTGGTAGTAT GATCTCATCG GGTTTCCTTA ACTATTCTGA TAACTTCCTC
ATCCGTACGA TGATCAGTCC TGCTGCCGTA GCCATCTACA GCATCCCGCA GAAGTTCATG
GAAGTGATAG AAATTATCCT CCGCAGCTTT GTCGCCACTG CACAGCCTAC ATTGTCAGGC
GCGGCCAACA GAAACGACTG GGCGGGTGTA TCAAGGGCAT TCTCCCGCTA TACCGGTGTG
GTAAGTATCG TGATCATTCC TTTTATTATT GGTCTGATCA TTTTTACCAA ACCGCTGATT
ATTATCCTGG CAGATAAAGC TTATCTTCCT GCCACGGATG TAGTAAGAAT ATTCCTGCTT
TGCGCCATCC TCTACCCTAT TGACCGCTTT ATAGGCGTAG CACTGGATAT GATCAACCGT
CCGCTGACCA ACTTCTATAA AAACTTCCTG AAACTGGTGC TTAACGTCAT CGGTGATATC
GTCTTCATCC TGTTGTTCCA TGATGTACGT TGGGTGGCGT TTGGTTCGCT GTTGAATATG
ATCATCTGCG TGATCGTCGG TTACTATATG CTGAAGAAAT ATGTACCGTT CACGCTGAAC
GATATTGTGA AACTCGGATG GGCAGAATGC CAGATCCTGC TGGAAAAGGT GACCGGAAAA
CTGAAGCTGG TCAAGTAG
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| Protein sequence | MGFKLLSVIN NRHFHSLLGN LVSAFLNVLS FAILVRLLSL SAFGEWVLFI GTYTVLDQIR
TALLQSGIIK FYTGSDEKTG KEVAGSAWYL VLILTGIYLL LNLIVGVALY GQFDETWRFF
IRWLGVMMVV SVPFNVASWF LQAEHRFDKI LQVRFWQNGG FLVLILAFHF FSTVTLPHVL
FAYMAGLAAT SCFTLIKGWT KVRQVVHSTK KQVLVLVKYG WLIVGSMISS GFLNYSDNFL
IRTMISPAAV AIYSIPQKFM EVIEIILRSF VATAQPTLSG AANRNDWAGV SRAFSRYTGV
VSIVIIPFII GLIIFTKPLI IILADKAYLP ATDVVRIFLL CAILYPIDRF IGVALDMINR
PLTNFYKNFL KLVLNVIGDI VFILLFHDVR WVAFGSLLNM IICVIVGYYM LKKYVPFTLN
DIVKLGWAEC QILLEKVTGK LKLVK
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