Gene Cpin_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3712 
Symbol 
ID8359880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4660116 
End bp4660850 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content45% 
IMG OID644965881 
ProductMethyltransferase type 11 
Protein accessionYP_003123375 
Protein GI256422722 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.435938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0474323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA GAAATCCCCA ATCCCGTTTT GACCTGGACA TTAAAAAGAC GGACAGGGTA 
CTTGAGGTTG GAGGCGGCCA CAATCCGCAC CCAAGGTCGA ATGTTGTGGT AGACAAGTAT
GTAGATGACA ATACACATCG TAGTGGAGAT ATAAAAGTGC TGAAGAACCA GCAGTTCATG
AATGCTGATG GTGAAAACCT GCCATTCAAG GACAAAGAGT TTGATTATGT GATCTGTAAT
CATGTACTGG AACACGTAGA AAATCCGCAT TCATTTCTCA AGGAACAATT CCGCGTAGCA
AAGAGAGGGT ATATGGAAAC CCCTTCTCTG CTGGGTGAAC ACCTCTATCC AAAGAAATCG
CATAAATGGG TGCTGCTGGA AGTAGATAAT AAGGTGGTAA TGGTAGACAA GGAAAGGATC
TCTTTCCCGA CCAGTTTCGA CTTTGGCGAC CTGTTCCTGG AATATCTGCC GAAGGCGTCT
ATCGGTTACA AAATCATGGA AAGAACGCAT CCGAATCTGC ATACGATGCG CGTGGAATGG
GAAGGTAGTT TTGACTTCAT CGTGAATCCG GATGATAAGG ATATCCTTAA ATACTTTGAA
GAGCCATGGA CCCGTGAAAT GGTGCTGCAT TATTTCCCAC AGCGTTCGCT GGGTAAAGAA
CTGGCAGAAG CCACCCGTGC ATTCACAGAT ATCTGCAGAA GTATTATCCG CTCAAAAGTG
CTGAAAAGAG TTTAG
 
Protein sequence
MKIRNPQSRF DLDIKKTDRV LEVGGGHNPH PRSNVVVDKY VDDNTHRSGD IKVLKNQQFM 
NADGENLPFK DKEFDYVICN HVLEHVENPH SFLKEQFRVA KRGYMETPSL LGEHLYPKKS
HKWVLLEVDN KVVMVDKERI SFPTSFDFGD LFLEYLPKAS IGYKIMERTH PNLHTMRVEW
EGSFDFIVNP DDKDILKYFE EPWTREMVLH YFPQRSLGKE LAEATRAFTD ICRSIIRSKV
LKRV