Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3709 |
Symbol | |
ID | 8359877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4656150 |
End bp | 4657073 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965878 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003123372 |
Protein GI | 256422719 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.530664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0910127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGG AAAATAACAT AGCACCGCTG GTTTCCATCG TAACGGTCAA CTATAATACC ACCGCCGTTA CCTGTGAATT GTTGCATTCC ATCAACGGCA ACAGTTACCG CAATGTGGAA GTGATCGTCG TGGATAATGC ATCCAAGGAA GATCCTACTG CCGCACTGCA GGCTGCATAT CCTGCTGTTA AAGTGATCAG AAGTGCGACC AATAAAGGAT TTGCCGGTGG TAATAACCTC GGTATCGTAG CCGCTACCGG CGAGTATATC TTCCTGGTGA ATAACGACAC CGAATTCACA GATGGCCTGA TAGAAGGTCT GCAGGAAGTA TTTCAGTCCC ATCCCGACGC AGGTATGGTA AGCCCCAAAT TTCACTACTA CTTTCATAAA GGTACGATCG AATATGCCGG CTATCAGTCA GTAGATGTAT TCACCGGCCG TAACAGCATG ATCGGCTGTA AAGAAGCCGA TCAGGGCCAG TACGATCAGC TCTCTGCAAC CAACTACGCA CATGGTGGCG GTATGATGAC CACTGCTGCC GTACTGAAAG AAGTGGGCCT CATGCCGGAA GTCTATTTCC TCTACTACGA AGAATTTGAC TGGTGCGAGC AGTTTAAACG CAAAGGCTAT AAAATCTACT ACCAGTATAA GTCACTTATC TATCATAAAG AATCAATGTC CACCGGTAAG AACAGTCCAT TAAAGACCTA TTACCTCACC AGGAACAGAA TCCTGTTCAT GCGTAGAAAT GTGGCATTAC CGAACCGAAT CATCTTTTTA CTGTACCTGA CCTTGTTTAC CATTCCGAAG AATACGTTAC AATTCCTGCT CAAACGGGAG AAGGAACACT TAAAGGCTTT CTGGAAAGGC ATTATGTGGA ACGTAAAACA TCGTCAATTA AATCTAATAC CATGTGTGGG ATAG
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Protein sequence | MSQENNIAPL VSIVTVNYNT TAVTCELLHS INGNSYRNVE VIVVDNASKE DPTAALQAAY PAVKVIRSAT NKGFAGGNNL GIVAATGEYI FLVNNDTEFT DGLIEGLQEV FQSHPDAGMV SPKFHYYFHK GTIEYAGYQS VDVFTGRNSM IGCKEADQGQ YDQLSATNYA HGGGMMTTAA VLKEVGLMPE VYFLYYEEFD WCEQFKRKGY KIYYQYKSLI YHKESMSTGK NSPLKTYYLT RNRILFMRRN VALPNRIIFL LYLTLFTIPK NTLQFLLKRE KEHLKAFWKG IMWNVKHRQL NLIPCVG
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