Gene Cpin_3684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3684 
Symbol 
ID8359852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4621043 
End bp4621924 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content47% 
IMG OID644965853 
ProductPpx/GppA phosphatase 
Protein accessionYP_003123347 
Protein GI256422694 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.131918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.207206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTG CTGCCATTGA TATCGGGTCT AACGCTGCAA GGCTGCTTAT TTCAGAAGCA 
TCGCCTAACA GCCAGGGCCG GATGGATTTT ACTAAAGTCA ACCTTATCAG GGTACCGTTG
CGTCTGGGTC TTGATGTATT CAGCGAAGGT GCGATTTCTG AGAAAAGAGC TACCCACCTG
CTCAATACCA TTAAAGCCTA CAAACTTTTG CTGGAAGTAT ACGAGGTGAA ATACCTGAAA
GCATGTGCTA CCTCAGCTAT GCGTGATGCT TCCAATGCAG CAGAAATTCT ACAGAACGTC
AGACAGCACA CCGGTATCGA CATCAAAGTT ATCTCAGGAC AGGAGGAAGC TTCTTTCCTC
TATGAGAGTC ACATCGCAGA GAACCTGGAT AAAACCCGCT CCTACATGTA TGTGGATGTG
GGCGGCGGTA GTACGGAAGT CACCATCTTC AGCAATAACA GCCTACGTTA TAAAGAGTCT
TTCAATATCG GCACTATCCG CCTGATGCAA CACCAGGTAA AGGACGATCA GTGGCAGTAT
ATGAAAGACA CGATTAAATC GCGCATCAAA GGGCTTGGTC CGATAACGGC CATTGGTTCC
GGCGGTAATA TCAACAAGAT CTTCTCTCTG TCCAAACGTA AGGAGGGTAA GCCCCTTACA
CTGGAAGTAC TGAAAGATTA CTATAAAGAA TTCAACGGTT TCAGCGTTGA AGAACGCATT
CATCTCTACA ATCTCCGGGA AGACCGTGCC GACGTCATTG TTCCCGCGCT GCAGATCTAT
ATCAATATTA TGCGCTGGGC GGACGCCGAA GAGATCTTTG TGCCTAAAAT CGGATTGGCA
GATGGCCTGA TCCAGTCTCT GTATGCCGAG ATTAGCCAGT AA
 
Protein sequence
MKLAAIDIGS NAARLLISEA SPNSQGRMDF TKVNLIRVPL RLGLDVFSEG AISEKRATHL 
LNTIKAYKLL LEVYEVKYLK ACATSAMRDA SNAAEILQNV RQHTGIDIKV ISGQEEASFL
YESHIAENLD KTRSYMYVDV GGGSTEVTIF SNNSLRYKES FNIGTIRLMQ HQVKDDQWQY
MKDTIKSRIK GLGPITAIGS GGNINKIFSL SKRKEGKPLT LEVLKDYYKE FNGFSVEERI
HLYNLREDRA DVIVPALQIY INIMRWADAE EIFVPKIGLA DGLIQSLYAE ISQ