Gene Cpin_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3681 
Symbol 
ID8359849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4617632 
End bp4619161 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content51% 
IMG OID644965850 
ProductAldehyde Dehydrogenase 
Protein accessionYP_003123344 
Protein GI256422691 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.160701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGG ATATTCTGCA ACAGTTACAT ATCGGGAATG TAAATAGAGG CGTCAGCACA 
GGTATCAACT GGCTGGATGC GAAAGGCGCC GTGATTGACG CATCTTCTCC TGTCGACGGA
CAACACATTG CTACCGTAAA AACGGCCAGC CGGGAAGATT ACGATACAGT CATCGCTACC
GCACAGGCAG CTTTCAGAGA ATGGCGTTTA TGGCCGGCTC CCCGCAGAGG CGAAGTAGTA
CGCCAGATCG GCGAAGCGCT ACGTCAAAAC AAAGAAGCAC TTGGCAAACT GGTCTCCTAT
GAAATGGGTA AAAGCCTGCA GGAAGGATAT GGTGAAGTAC AGGAAATGAT CGACATCTGT
GACTTCGCGG TGGGTCTCTC CCGTCAGTTA CACGGTCTGA CGATGCATTC CGAACGTCCT
GGTCACAGGA TGTATGAGCA ATGGCATCCA TTGGGCATTA CAGGCATTAT TTCGGCCTTT
AACTTCCCGG TTGCAGTATG GAGCTGGAAC GCGATGCTTG CCTGGATATG CGGCGATGTG
TGCGTATGGA AGCCATCCGA GAAAACGCCT TTGTCCGCTA TAGCGTGTCA GCATATTGTA
CAGGATGTAC TCAAAGCGAA TAAGGTACCG GAAGGCGTTT GCTGTCTTGT GACAGGTGGT
CGTGATACCG GTGAATGGAT TGCCGCGGAC ACCCGTGTGC CATTGGTATC TGCTACCGGA
TCTACCCGCA TGGGTAAAGC CGTAGGAAGT GTGGTAGGCG CCCGTCTGGG TCGTTCCCTG
CTGGAACTGG GTGGTAACAA CGCCATCATC ATCACGGCAG ATGCAGACCT CAATATGTCC
CTGATCGGTT GTGTATTCGG CGCGGTAGGT ACGGCAGGAC AACGTTGTAC CAGTACCCGC
AGACTCATCA TCCATGAAAG TGTTTATGAG ACATTTACAA AGAAACTGGC CAAAGCCTAC
CAGCAACTAC GTATCGGTAA TCCGCTGGAT GAGCACAATC ATGTTGGTCC GCTGATCGAT
AAAGACGCTG TCAATCTCTA TCTCGACTCC ATCGAAAAAG TAAAAGCTCA GGGCGGTAGC
TTCCTGGTAG AAGGTGGCGT ATTATCCGGC GATGCGTATA GCTCCGGATG TTATGTAAAA
CCTTGCATTG CAGCCGTTGA GAACGCCTAT CCGATTGTGC AGCATGAGAC CTTCGCTCCT
ATCCTGTATG TCATGAAATA CAGCAGGATT GAAGAGGCGA TTGCGATGCA AAACAATGTA
CCGCAGGGGC TGTCTTCTGC CATCATGACC CTCAATCTGC GTGAGGCGGA ATTGTTCCTT
TCCCAGGCGG GTTCTGACTG TGGTATCGCT AACGTCAACA TTGGTACTTC CGGTGCGGAA
ATAGGCGGTG CATTCGGGGG TGAAAAAGAA ACCGGCGGTG GCAGGGAAAG TGGCTCTGAT
GCCTGGAGAG CATATATGCG CAGACAGACG AATACGATCA ATTATTCAAC ACATTTGCCA
TTGGCGCAGG GGATTAAATT TGATCTGTAA
 
Protein sequence
MIQDILQQLH IGNVNRGVST GINWLDAKGA VIDASSPVDG QHIATVKTAS REDYDTVIAT 
AQAAFREWRL WPAPRRGEVV RQIGEALRQN KEALGKLVSY EMGKSLQEGY GEVQEMIDIC
DFAVGLSRQL HGLTMHSERP GHRMYEQWHP LGITGIISAF NFPVAVWSWN AMLAWICGDV
CVWKPSEKTP LSAIACQHIV QDVLKANKVP EGVCCLVTGG RDTGEWIAAD TRVPLVSATG
STRMGKAVGS VVGARLGRSL LELGGNNAII ITADADLNMS LIGCVFGAVG TAGQRCTSTR
RLIIHESVYE TFTKKLAKAY QQLRIGNPLD EHNHVGPLID KDAVNLYLDS IEKVKAQGGS
FLVEGGVLSG DAYSSGCYVK PCIAAVENAY PIVQHETFAP ILYVMKYSRI EEAIAMQNNV
PQGLSSAIMT LNLREAELFL SQAGSDCGIA NVNIGTSGAE IGGAFGGEKE TGGGRESGSD
AWRAYMRRQT NTINYSTHLP LAQGIKFDL