Gene Cpin_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3677 
Symbol 
ID8359845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4614648 
End bp4615061 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content43% 
IMG OID644965846 
Producthypothetical protein 
Protein accessionYP_003123340 
Protein GI256422687 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.378815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.158939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC AAGAAGAAAG AAACTGGGCG CTCGCCATGC ACCTGGCTGG TATCGCCGGT 
ATGCTGTTCA TTCCACCTGC AGGTAATATC ATTGCAGCAC TGGTATTGTG GCTGATTAAA
CGTAATGAAT CCGAGTTTCT GAATGAAACC GGTAAAGAAG CGCTGAACTT TCAGATTACT
CTGAGTATTA TCAATGTAGG GCTTAATTTA ATAGGGATGC TTAACCACTG GGAGTGGAGC
TGGGGCAGAC CAGGATTTAA CTATTATTAC TGGGATTTAA GGCACTTCTC ACTGTTTCAT
GGTACGAGAG GGATTGTGAT GGTGGTGAAT ATTGTGTTTT CGGCTATTGC GGCGTCGAAG
GCGAGTAACG GAATATTTTA TAAGTATCCG CTGAGTTGGA GATTGGTGAA ATAA
 
Protein sequence
MKQQEERNWA LAMHLAGIAG MLFIPPAGNI IAALVLWLIK RNESEFLNET GKEALNFQIT 
LSIINVGLNL IGMLNHWEWS WGRPGFNYYY WDLRHFSLFH GTRGIVMVVN IVFSAIAASK
ASNGIFYKYP LSWRLVK