Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3675 |
Symbol | |
ID | 8359842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4612334 |
End bp | 4612771 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965844 |
Product | DoxX family protein |
Protein accession | YP_003123338 |
Protein GI | 256422685 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00136141 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.200959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTAC TACAACGAAT AGACCGTTGG GGTGAGACGC ATCATCCGCG TTGGCTGGAT GCTATACGTG TACTCCTGGG AGTCTTTTTA TTCTACAAAG GGGTGGTTTT CATACAAAAT ATCGATGTTC TTAAATCTGT GATCAACGAA AATCCGGTCC TCACAGTAAT GTCGTTCTGG CTTGCTCACT ACATTGTCTT TGCTCATCTG GCTGGTGGAG TACTTATTAT TTTCGGCTTA CTTACACGCG TGGCTATTCT TGCCAACATT CCCATCTTAA TCGGCGCCAT CTTTTTTGTA CATACCTCTA CAGGGTTATT TAATGTACAT GGTGAAGCCG GCCTTTCTAT CCTTGTTCTG CTGTTACTTG TCTTCTTCCT TGTGGAGGGC AGCGGCCCCA TTTCGTTTGA CGAATATATG CGCCGTCACC CGGCATGA
|
Protein sequence | MNLLQRIDRW GETHHPRWLD AIRVLLGVFL FYKGVVFIQN IDVLKSVINE NPVLTVMSFW LAHYIVFAHL AGGVLIIFGL LTRVAILANI PILIGAIFFV HTSTGLFNVH GEAGLSILVL LLLVFFLVEG SGPISFDEYM RRHPA
|
| |