Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3656 |
Symbol | |
ID | 8359823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4590966 |
End bp | 4591508 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965825 |
Product | YceI family protein |
Protein accession | YP_003123319 |
Protein GI | 256422666 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0464334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0393691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACT GGAAGATCGA TGAATCACAC AGCGAAATTG GATTCAAAGT AAAACACCTG ATGATCACAA ACGTAAGCGG TTACTTTACG GAGTTTACAG GAAGTGTTAA GACTGAAAGC GCGGATTTTC ACGATGCGAC GATCACTTTT GAAGCAACAA CAGCGAGCAT CACTACCAAC AACAAACAGA GAGACGAGCA CCTGAAAGGT GGTGAGTTCT TCGATACAGA GCATCATCCT AAAATCTCTT TCGTATCTAA AAAGATTAAA AAAGTAACAG AAGAAGAATA TAAACTGATC GGCGATCTGA CGATCAAAGG TCATACGCAT AGTATCGAAC TCGATGTTTT ACGCAATGGT GTTGTGACAG ATCCATACGG ACAGGAGAAA GAAGGCTTTT CCATCAAAGG CCGCCTGCAC CGCGCAGACT ACGGACTGCG TTGGAATGCA GCTACAGAAG CAGGTAGCAT CGTACTGAGC GATGAAGTAA AACTGCTGAT GGAAGTGCAG CTGGTAAAAG AATCTGTGCC TGTATTGGCA TGA
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Protein sequence | MTHWKIDESH SEIGFKVKHL MITNVSGYFT EFTGSVKTES ADFHDATITF EATTASITTN NKQRDEHLKG GEFFDTEHHP KISFVSKKIK KVTEEEYKLI GDLTIKGHTH SIELDVLRNG VVTDPYGQEK EGFSIKGRLH RADYGLRWNA ATEAGSIVLS DEVKLLMEVQ LVKESVPVLA
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