Gene Cpin_3656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3656 
Symbol 
ID8359823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4590966 
End bp4591508 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID644965825 
ProductYceI family protein 
Protein accessionYP_003123319 
Protein GI256422666 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0464334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0393691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACT GGAAGATCGA TGAATCACAC AGCGAAATTG GATTCAAAGT AAAACACCTG 
ATGATCACAA ACGTAAGCGG TTACTTTACG GAGTTTACAG GAAGTGTTAA GACTGAAAGC
GCGGATTTTC ACGATGCGAC GATCACTTTT GAAGCAACAA CAGCGAGCAT CACTACCAAC
AACAAACAGA GAGACGAGCA CCTGAAAGGT GGTGAGTTCT TCGATACAGA GCATCATCCT
AAAATCTCTT TCGTATCTAA AAAGATTAAA AAAGTAACAG AAGAAGAATA TAAACTGATC
GGCGATCTGA CGATCAAAGG TCATACGCAT AGTATCGAAC TCGATGTTTT ACGCAATGGT
GTTGTGACAG ATCCATACGG ACAGGAGAAA GAAGGCTTTT CCATCAAAGG CCGCCTGCAC
CGCGCAGACT ACGGACTGCG TTGGAATGCA GCTACAGAAG CAGGTAGCAT CGTACTGAGC
GATGAAGTAA AACTGCTGAT GGAAGTGCAG CTGGTAAAAG AATCTGTGCC TGTATTGGCA
TGA
 
Protein sequence
MTHWKIDESH SEIGFKVKHL MITNVSGYFT EFTGSVKTES ADFHDATITF EATTASITTN 
NKQRDEHLKG GEFFDTEHHP KISFVSKKIK KVTEEEYKLI GDLTIKGHTH SIELDVLRNG
VVTDPYGQEK EGFSIKGRLH RADYGLRWNA ATEAGSIVLS DEVKLLMEVQ LVKESVPVLA