Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3655 |
Symbol | |
ID | 8359822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4590308 |
End bp | 4590763 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965824 |
Product | ribonuclease H |
Protein accession | YP_003123318 |
Protein GI | 256422665 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00499502 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0620959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAG TTATTATTTA CACGGACGGT TCCTCCCGCG GTAACCCAGG CCCAGGTGGC TATGGTGTTG TGCTGATGTG GAACAGTGTC CGCAAGGAAT TATCACAGGG ATATCGCCTC ACCACCAACA ACCGTATGGA ACTGATGGCA GTTATCGTAG CCCTCGAAGC ATTGAAGAGA GACGGACTCC AGGTCAAGAT CTTTACAGAT AGCCAGTATG TAGTCAACAG CGTTGAAAAA GGCTGGCTCT GGGGCTGGGT TAAGACCGGT TTTAAAGACA AAAAGAATAA GGACCTCTGG CAGCGTTTTA TTCCTGCTTT TAAAAAACAC CAGGTGAAGT TCAATTGGGT AAAAGGACAC TCCACTAATC CTTTGAACAA CCGTTGCGAC GAACTGGCCA CACAGGCTGC CGATAGCGGC AACTGGCTGG ATGATGTCGG CTTCGAAGGA GAATAG
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Protein sequence | MSEVIIYTDG SSRGNPGPGG YGVVLMWNSV RKELSQGYRL TTNNRMELMA VIVALEALKR DGLQVKIFTD SQYVVNSVEK GWLWGWVKTG FKDKKNKDLW QRFIPAFKKH QVKFNWVKGH STNPLNNRCD ELATQAADSG NWLDDVGFEG E
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