Gene Cpin_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3655 
Symbol 
ID8359822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4590308 
End bp4590763 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content49% 
IMG OID644965824 
Productribonuclease H 
Protein accessionYP_003123318 
Protein GI256422665 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00499502 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0620959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG TTATTATTTA CACGGACGGT TCCTCCCGCG GTAACCCAGG CCCAGGTGGC 
TATGGTGTTG TGCTGATGTG GAACAGTGTC CGCAAGGAAT TATCACAGGG ATATCGCCTC
ACCACCAACA ACCGTATGGA ACTGATGGCA GTTATCGTAG CCCTCGAAGC ATTGAAGAGA
GACGGACTCC AGGTCAAGAT CTTTACAGAT AGCCAGTATG TAGTCAACAG CGTTGAAAAA
GGCTGGCTCT GGGGCTGGGT TAAGACCGGT TTTAAAGACA AAAAGAATAA GGACCTCTGG
CAGCGTTTTA TTCCTGCTTT TAAAAAACAC CAGGTGAAGT TCAATTGGGT AAAAGGACAC
TCCACTAATC CTTTGAACAA CCGTTGCGAC GAACTGGCCA CACAGGCTGC CGATAGCGGC
AACTGGCTGG ATGATGTCGG CTTCGAAGGA GAATAG
 
Protein sequence
MSEVIIYTDG SSRGNPGPGG YGVVLMWNSV RKELSQGYRL TTNNRMELMA VIVALEALKR 
DGLQVKIFTD SQYVVNSVEK GWLWGWVKTG FKDKKNKDLW QRFIPAFKKH QVKFNWVKGH
STNPLNNRCD ELATQAADSG NWLDDVGFEG E