Gene Cpin_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3648 
Symbol 
ID8359815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4582439 
End bp4582882 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content49% 
IMG OID644965817 
Productcytochrome c class I 
Protein accessionYP_003123311 
Protein GI256422658 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00073069 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.303937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAT GGATACTGGC AGCAATGCCA TTGTTAATAG CGGGATTATA CGTGAGCGCG 
CAGGTGAAGA AACCAGCCAA ATCTGCGGCA AAACCGGTAG CCGCATCTGC AGCAACTATC
GCAAGGGGAA AGGCCTTATA CCGGCAGTAC TGTATCTCCT GTCACCAGGA GAATGGCAGC
GGCGTACCCC GTATGAACCC ACCGTTGATT AAAACGGAAT ATGTATTGGG CGATAAGCCA
AGGCTGATCG GCATCTTACT GAACGGGTTC AACGAAGACG TAGAGATTAA CGGTGATTAC
TATTCTAATC CGATGCCTTC ACAGGCAGCA CTGAAGGACC AGGAGATTGC CGACATCCTT
TCTTATGTCA GAAACAGCTT TGGCAACAAG GCAAGTACCG TTTCAGCAAC AGAAGTAACG
CAGGTACGGG GAGCCAAAAA GTAA
 
Protein sequence
MGKWILAAMP LLIAGLYVSA QVKKPAKSAA KPVAASAATI ARGKALYRQY CISCHQENGS 
GVPRMNPPLI KTEYVLGDKP RLIGILLNGF NEDVEINGDY YSNPMPSQAA LKDQEIADIL
SYVRNSFGNK ASTVSATEVT QVRGAKK