| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3647 |
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| Symbol | |
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| ID | 8359814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4581133 |
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| End bp | 4582437 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965816 |
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| Product | L-sorbosone dehydrogenase |
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| Protein accession | YP_003123310 |
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| Protein GI | 256422657 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000551723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.19553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGC AAACAACAAG CAAGGTATTA CTGATGTCTG TCATTGCGAT GACGACTATC
ACTTCCTCCG TATTCGCAGG CGGACCTGAT AAGCCAGGCG CCGCTGTCGT TAAACCTGAT
GCAGACAATG CAGGACTGAA ACTGCCTGCG GGCTTTGGCG CACTCAAAGT AGCCGATGGC
CTGGGCCGTA CCCGCCACAT TGCTGTGACT GACAACGGCA GTATCTATGT TAAACTGGAC
AGGGCAAAGA ACAACAATGG TATCCTGTTC CTGCAGGACA CCAATGGTGA CGGCAAGGTC
GATAAGCAGT CCGGTTTCGG TAACTATGGC GGAACAGGTA TCTATGTGAA AGGCGATTAC
CTGTACGCTA CTTCCAATGA AAACATCTAC CGCTATAAGC TGGATGCACA GCAGCAGGTA
ACTGATCCGG CGCATCCGGA AACAGTGGTA AGCGGTCTAC TGGACCGTCG TCAGCATGAG
TCCAAGTCGA TCGTACTCGA TGATGCCGGC AACATTTATG TGAATGTGGG GGCTTATTCC
AACTCTTGCC AGACCCAGGA CAGAACACAG GGTTCTTTGG GGATGCAGCC TTGTCCGGTG
CTGGACTCTG CCGGTGGTAT CTGGCAGTTC AAAGCAGATA AACTGAACCA GGCATATGGC
GATGGCGTAC GTTATGCAAC CGGTCTGAGA AACGTTGTCG GACTGGATTG GAACAAAAAA
CAAAACCAGC TTTTCGTCAT GCAGCATGGC CGTGATCAGT TACATGATCT GTTCCCGTCT
TTGTATACAG AGAAACAGTC TGCGGACTTA CCGGCAGAAT GTATGTATGC GTTGAAACAG
GGATCTGACT GCGGATGGCC TTACATCTAC TACGATCCGT TCACCAGCAA GAAAATGCTG
GCGCCTGAAT ATGGTGGCGA TGGCAAAAAG ACAGGAGGTG AGACAGCGGA AGATCCTGTA
GTAGCATTCC CGGCACATAT GGCGCCTGAC GGACTGCTGT TCTATACCGG CACCCAGTTC
CCCGAGAAAT ACCGTAATGG TGCTTTTATC GCTTTCCATG GTTCCTGGAA CCGTTCTCCG
GAAAACCAGG CGGGATATTA TGTGGTATTT GTACCGTTTA AAGATGGTAA ACCATCCGGT
AAATGGGAAG TATTCGCAGA TGGATTTGCA GGACCTGGTC CGGTGAAGTC ACCAGGAGAT
GCGCAACACC GTCCCTGCGG ACTGGCACAG GGCCCTGATG GTTCACTGTA TGTAACAGAT
GATGCGAAAG GAACAGTTTA CAGGATCGTT TATAAGACAA AATAG
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| Protein sequence | MPMQTTSKVL LMSVIAMTTI TSSVFAGGPD KPGAAVVKPD ADNAGLKLPA GFGALKVADG
LGRTRHIAVT DNGSIYVKLD RAKNNNGILF LQDTNGDGKV DKQSGFGNYG GTGIYVKGDY
LYATSNENIY RYKLDAQQQV TDPAHPETVV SGLLDRRQHE SKSIVLDDAG NIYVNVGAYS
NSCQTQDRTQ GSLGMQPCPV LDSAGGIWQF KADKLNQAYG DGVRYATGLR NVVGLDWNKK
QNQLFVMQHG RDQLHDLFPS LYTEKQSADL PAECMYALKQ GSDCGWPYIY YDPFTSKKML
APEYGGDGKK TGGETAEDPV VAFPAHMAPD GLLFYTGTQF PEKYRNGAFI AFHGSWNRSP
ENQAGYYVVF VPFKDGKPSG KWEVFADGFA GPGPVKSPGD AQHRPCGLAQ GPDGSLYVTD
DAKGTVYRIV YKTK
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