Gene Cpin_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3645 
Symbol 
ID8359812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4579141 
End bp4580274 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content49% 
IMG OID644965814 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003123308 
Protein GI256422655 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.168223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.516752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGC AGCAGCAGAT ATTATTTCAG CCCTTAACAC TGGGAAAAAG ATACAGCAGA 
AACAGGTTTG CCCTGGCCCC CATGACCAGG AGGAGCGCAA CTGCCACAGG CGTACCTACT
GATGAAATGG CCGCCTATTA TGCCGCATTT GCGGCCGGGG GCTTCGGTAC GATCATTACA
GAAGGTACCT ATACAGATAC ATTATTCAGT CAGACAGATG CCCATCAACC CGGACTCGTC
AACGAAGCAC AACTCGCAGG ATGGAAAACT GTCGTAGATA AAGTCCATGA GGAGGGACGG
GATGCCAATG GTAATACCGC CCTTATCATC CTGCAACTCA TGCACGGTGG CGCCCTCGTA
CAACATACTG ACAACACCAT CGCTCCTTCC GCCGTACAAC CTGTTGGTAT CAGAAATACA
GAAGCCAATG GACTCAAAGG GCCATTTCCG TTGCCTGCCG TTATGACCAC GGCTACCTTA
GCCACCGCTA AAGCGGGTTT TGTTGCCACC GCTCTGAGGG CAGTAGCCGC AGGATTTGAC
GGCGTAGAGA TACATGCCGC CAATGGTTAC CTGCTTGACC AGTTCATTAC TCCTCATACC
AATATCAGAG AGGATGCGTA TGGGGGTAAT TATCGGAACA GATTACGTTT TCTGATGGAA
GTATACCAGG AGATCAAAGC CGCTGTACCG GCTGATTTCA TTGTTGGGAT GCGTCTCTCT
GAAAGTAAGG TAAACGATCT TTCTTACAGA TGGCCGGAAG GCGCAGCTGC TGCTACGGCT
ATCTTCAAAG TCCTAAAAGA ACTGGAAGCA GATTATATCC ATATCGCTGC CGAAGGTGGT
AACTGGGGAA GAGAATCCTT ATACAGTGAC GGACGATCCT CGAATGGTAT CGCCAGGAAA
ATAACCGGCC GGCCTGTCAT TGTGAATGGA GGAATGCATG ATATGACATT GGCTACAGAA
CTGCTAAATG CGGCGCAGGC AGATATGGTG TCTATAGGAA AGGCTGCTAT CAGCAACCCT
GATCTGCCTA ATAAAATAGC CAGAGGGGAA GCCCTGATCG CATTTTCTAA GACCCTGATC
AAGGATAGTC TGACGATTTC AAACGTTGGA AAACAATTAG GAATTAGGAA TTAA
 
Protein sequence
MTKQQQILFQ PLTLGKRYSR NRFALAPMTR RSATATGVPT DEMAAYYAAF AAGGFGTIIT 
EGTYTDTLFS QTDAHQPGLV NEAQLAGWKT VVDKVHEEGR DANGNTALII LQLMHGGALV
QHTDNTIAPS AVQPVGIRNT EANGLKGPFP LPAVMTTATL ATAKAGFVAT ALRAVAAGFD
GVEIHAANGY LLDQFITPHT NIREDAYGGN YRNRLRFLME VYQEIKAAVP ADFIVGMRLS
ESKVNDLSYR WPEGAAAATA IFKVLKELEA DYIHIAAEGG NWGRESLYSD GRSSNGIARK
ITGRPVIVNG GMHDMTLATE LLNAAQADMV SIGKAAISNP DLPNKIARGE ALIAFSKTLI
KDSLTISNVG KQLGIRN