| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3643 |
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| Symbol | |
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| ID | 8359810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4573815 |
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| End bp | 4577075 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965812 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003123306 |
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| Protein GI | 256422653 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.15651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.747331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATG TAGACCTGTT GAAGGTCAGG CATCGTTATG CCTGGCAGTC AGCACTATTG
CGCGTGAAAT TTACCTTGCT GCTTTTTTTA CCTGCCCTGT ATCCGCTTGT AGCGGCGGCA
GATGGTTATC ACACCTTATT CTCTGTACAA CAGGATGTCA CTTTAAAGGG AAAGATCGTT
GATAAAAATA AAGAACCTGT AATCGGTGCT ACTGTCAAAG TGGTAGGCAC TTCCAAAGGT
ACCACTACGC TTCCGGACGG GACTTTTACT TTAAACGTCG CGAATGGCGC TCAAATCACT
GTTTCTGCAA TCGGTTTCCT ACCGCAAACG CTCACTGTAA ATGGAAATGG GCCGCTCACT
ATTACCCTCG ATGCCGACAC GAAAGGTCTT AGTGAAGTAG TCGTGGTAGG TTACGGCGCA
CAGAAAAGAG AAGCCGTATC GGGTTCTATC GCGACTGTAA AAGGTGCTGA CCTGGTGAAA
TCCCCCGCTA CTAACTTATC CAACTCCATC GCTGGTCGTA TGCCCGGTGT GACCGCTATG
CAAAACAGTG GTGAACCTGG TGCAGACGGT TCCTCTCTGC GTATCCGTGG ATCCAATACC
CTGGGTAATA ATGACCCACT TGTGGTTATC GATGGTGTGG CAGGTCGTAC CGGTGGACTG
GAACGCCTGA ATCCGCAGGA TATTGAAAGC ATCTCCGTAT TGAAAGATGC TTCTGCGGCC
ATCTATGGTG CACGTGCAGC AAATGGCGTT ATCCTCGTGA CCACCAAACG TGGTAAAAGT
GGTAAGCCGC AGCTGAATTA TTCCTTTAAC CAGGGATGGT CTCAGCCGAC GCATATCCCG
GAAATGTCAG ACGCAGCTGA ATATGCACAG GTGCGTGATG AACTGAGCCT CTACCGTGAT
GTTCCCGGCA AGGAATGGTC AGATGCATGG TCCGTATACA AACAGGGGGG GGCTTATACT
TCACCTACTA CCAATAAAAA ATGGGATGTC GCTTTCGGTC CTTCCGAAAT TGACAAGTTC
CGCAACAGCA CTGATCCATG GTTGTATCCT AATACAGACT GGTACAAGTC TACATTTAAA
ACATGGGCGC CACAGTCAAA CCATAGTGTA CAGGTCTCCG GCGGCAACGA GAACATGCGC
TATCTGACGT CCTTCGGTTA TCAGTCACAG GACGCTTATT ATAAGAAATC AGCGACCGGT
TATGACCAGT ATAGTCTGCG GGTTAACCTC GACGCCAAAA TCAATAAATA TGTCAACGTG
AGCGTAGACA TGTTAGGTCG TCAGGAAGAA CGTAATTACC CTACCCGTAG CGCCAGCGAT
ATCTTCCGTA TGCTCATGCG TGGTAAGCCG ACAGAACCTG CTTTCTGGCC GAACGGCCTG
CCTGGTCCGG ATATCGAATA TGGAAACAAC CCGGTAGTCA TCACCACCGA CCAGACCGGC
TACGATAAAG ACAAACGTTA TTACGTACAG ACCAATGCCC GTCTCGACAT CCTTGTACCT
GGCGTAGAAG GATTGAAACT GAGCGGTAAC GTGGCATTTG ATAAATACCT GAAACGTACG
AAGAGATGGA TGACACCATG GTACCTCTAT ACATGGGATA AGAAAACGTA TGAACAGGAT
GGTACGACGC CGCAGCTGGT GAGAAGTAAA CGTGGTACTG ATCAGGCGAC ACTCAACCAG
GGTGATGAAG ATCAGAGCAA CGTATTGCTG CGTGGTTTAT TGACTTACGA CCGCACCTTT
AACAAAAATC ATACACTGAA CTTTGTGTTT GGTATTGAAA GAGAAACTGT ACACTCTGAT
AATTTCAACG CACTCCGCAA ATACTTTATT TCTCCATTGA TCGACCAGAT GTTTGCTGGT
GGCGATGCAG AAAAAGACAA TGGGGGCTCT GCGTGGGACC GTGCACGTCT GAACTATTTT
GGTCGTGTGG CTTACAACTA CAAAGAGAAA TACCTCGCTG AGTTTGTATG GCGTAATGAT
GGTTCCTACA TGTTCCCGTC TACTTCCCGT TTCGGATTCT TCCCGGGTCT GATGCTCGGC
TGGCGCGTGT CAGAAGAGAG TTTCTGGAAG GACAACGTGA AGTTCATGAA TTACCTGAAA
CTGCGCGCAT CCTGGGGTAA ACTGGGTAAT GACCAGGTAT ACTTCGATGA CAACAATGAC
GGTACGCTTA CCTTACAGGA ATATCAGTAC TATTCTACAT ATGGATTCAG CAGTTACATC
CTGGGTGGTA ACGTCCTCAA ATCATTGTAT GAGGCGCGAA TTCCGAATCC GTATATCTCC
TGGGAGGTGG CTAACAACTA CAACGTTGGT CTGGATGGAG CTTTACTCGA CGGTAAGATC
TACTTCGAAC TGGACGCGTT CATGAACAAA CGTTCCGGTA TCCTGGTAAG AAGAAATGCT
TCTGTTCCGC AAACAACCGG TATGACGCTG CCAGCAGAAA ATATCGGTAA AGTAGATAAT
AAAGGTTTCG AATTCCGCAT CGGATACAAC AGTACCGTAG GTACTAAATT CCGCTATGAT
GTGAGTGTGA ATGGCGGGTA CTCTAAAAAT AAGATCGTAT TCTGGGATGA AGCACCTGGT
GCACCGGTAT GGCAACGTTC CACCGGTATG CCAATGAATA CGGCGCTCTA TTATGAATAT
GACGGCGTAT TTAAAGATTA TGCAGAGATC GATAAGAACA CCATTAACTA CTCTGCACTC
ACAAACAATC TCCGCCCGGG TGATATGAAG TTCAAAGATA TCGATGGTAA CGGTAAGATT
GATGGTGATG ATAAGATCCG TTATAATAAA AGTTCCCAGC CTACATTCAC CGGCGGTCTG
AACGTGAATC TGCAATACAG CAACTTCGAC TTCGCCTTGC TCGTACAAGG TGCTACCGGC
GGTGCATTGC ATATCAATAC AGAATCCGGT GAGATCGGCA ACTTTACACA GGACTATTTC
GATCATCGCT GGAGTCCGGA CAATCCAAGC AGCGTTGATC CCCGTGTAAA CGACCGTAAC
GACACTTATT GGGCTACCGG TAATACTTAC TGGGTACGCA GCACTAACTA CGTGCGTCTG
AAAAATCTGG AGATCGGCTA CAGCATTCCT GAGTTTCTGA AGAAGAAAGC AGGTATCACA
AATCTGAGGA TTTACGCCAA CTGTTTAAAC CTGTTCACCA TTGACAACCT GAAGATCCTT
GATCCGGAGT CAGTGAACGG AAATGGCCAG TATTATCCGC AATCAAGGGT ATTGAATGCC
GGTTTCAATT TAACCTTTTA A
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| Protein sequence | MKNVDLLKVR HRYAWQSALL RVKFTLLLFL PALYPLVAAA DGYHTLFSVQ QDVTLKGKIV
DKNKEPVIGA TVKVVGTSKG TTTLPDGTFT LNVANGAQIT VSAIGFLPQT LTVNGNGPLT
ITLDADTKGL SEVVVVGYGA QKREAVSGSI ATVKGADLVK SPATNLSNSI AGRMPGVTAM
QNSGEPGADG SSLRIRGSNT LGNNDPLVVI DGVAGRTGGL ERLNPQDIES ISVLKDASAA
IYGARAANGV ILVTTKRGKS GKPQLNYSFN QGWSQPTHIP EMSDAAEYAQ VRDELSLYRD
VPGKEWSDAW SVYKQGGAYT SPTTNKKWDV AFGPSEIDKF RNSTDPWLYP NTDWYKSTFK
TWAPQSNHSV QVSGGNENMR YLTSFGYQSQ DAYYKKSATG YDQYSLRVNL DAKINKYVNV
SVDMLGRQEE RNYPTRSASD IFRMLMRGKP TEPAFWPNGL PGPDIEYGNN PVVITTDQTG
YDKDKRYYVQ TNARLDILVP GVEGLKLSGN VAFDKYLKRT KRWMTPWYLY TWDKKTYEQD
GTTPQLVRSK RGTDQATLNQ GDEDQSNVLL RGLLTYDRTF NKNHTLNFVF GIERETVHSD
NFNALRKYFI SPLIDQMFAG GDAEKDNGGS AWDRARLNYF GRVAYNYKEK YLAEFVWRND
GSYMFPSTSR FGFFPGLMLG WRVSEESFWK DNVKFMNYLK LRASWGKLGN DQVYFDDNND
GTLTLQEYQY YSTYGFSSYI LGGNVLKSLY EARIPNPYIS WEVANNYNVG LDGALLDGKI
YFELDAFMNK RSGILVRRNA SVPQTTGMTL PAENIGKVDN KGFEFRIGYN STVGTKFRYD
VSVNGGYSKN KIVFWDEAPG APVWQRSTGM PMNTALYYEY DGVFKDYAEI DKNTINYSAL
TNNLRPGDMK FKDIDGNGKI DGDDKIRYNK SSQPTFTGGL NVNLQYSNFD FALLVQGATG
GALHINTESG EIGNFTQDYF DHRWSPDNPS SVDPRVNDRN DTYWATGNTY WVRSTNYVRL
KNLEIGYSIP EFLKKKAGIT NLRIYANCLN LFTIDNLKIL DPESVNGNGQ YYPQSRVLNA
GFNLTF
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