Gene Cpin_3635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3635 
Symbol 
ID8359802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4564486 
End bp4566210 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content47% 
IMG OID644965804 
Productpeptidase S15 
Protein accessionYP_003123298 
Protein GI256422645 
COG category[R] General function prediction only 
COG ID[COG2936] Predicted acyl esterases 
TIGRFAM ID[TIGR00976] putative hydrolase, CocE/NonD family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.958468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.454344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGA AACCTGCTCT GCTGATTGTA ACCTGTTTCC TGCTATATGG CAGCCTGCTC 
TCCGCACAAC AAAAGCGATA TGTGATAGAC AGTACACTGG AAATTCCATT GAAAGATGGG
ACCGTGCTGA GTTGTATGTT ATTGTACCAG GAAGGGGCTA AATTGCCCTT ACCGGTCGTA
TTGCGTGCCA ACTGTTATCC CTCTAAATAT GATACACTGA GAGCCCAGTA TGTAGCAGAT
AGCGGTTATG CAGGCGTTTT TGTCTATAAC CGGGGGAAGT CCCGTTCCAG CGGTAGTTTT
TATCCTATGG AAAATGATGC TGCCGACAAC TACGCGGCTA TCGACTGGAT CAGTAAACAG
TCCTGGTGTA ACGGAAAGAT CGCTATGTAC GGTGGTTCTT ATCTGGGCTT CGCACAATGG
GCAACGGTTA AAAAGATACA TCCTGCCCTT AAAACCATCG TTCCGCAGGT CGCTGTAGGC
CCTGGTATCG ATTATCCCAA TCCTGGCGGC ATCTTTCTTA CTTACATGCT GCAATGGCTG
AAATACGTCC GTAATAACCA TTATCTCGAT GACGCAACTT TTCTTGATGA AAAGAAATGG
AAGCAGCTGA ACACTGATTA CCTGTTACGG GGAATGCCTT TCAGTGAATT GGATAATCTG
GAAGGAAGCG GCATGGATAC CATCTTTCAG CGCTGGATCC AGCATCCGGG AAATGATGAA
TACTGGCAAC AGATGACGCC CACACAGGAA GAGTTCTCCC GTATTAATAT CCCGATCCTC
ACTACAACGG GTTATTTTGA TGATGATCAG CGGGGGGCTA TCTATTACTA TAACATGCAT
AATAAATATG GTCCCGCAGC TGGTGTGAAA GAACATTATC TGTTTATCGG TCCTTTTGAC
CATGCCGGGG GGCAAGGAGG CAAACGCAGA AATCCGATAC CTCCCTACGA AATTGATACG
GTAGCCATGG TAGATCAGAA GCAACTGGTG CTGGATTGGT TCAATTATAC CCTTAAGGAT
GGGCCTAAAC CGGCTTTTTT ACAGGACAGG ATCTCGGTAT TTGCTATGGG AGAAAATAAA
TGGCATTATT TCCCCTCACT TGAAAAAATG AACAGGGACA CACTGACCTA CTATCTGCCT
TCCAGGCAGG AAGAGGCCAT GAGTATACGG AAGAGAGGAG GGAAGAAGCC GCTGGTATTG
TCTTTTGATG CAGCAGATAC TGTTGACGAT ACGCTTATCA TTTACGATGG AACCAGCTCC
CTGGTATCAG AAGCTGTATT TAAAAAGAAA TACCTGTTGA CACTCACTAC GCCGCCACTG
GATCATGATA TGATACTGAA CGGAAGTATT ACGGCTGACC TCTGGCTATC GTCCGGTACG
CCTGATGCAG ACCTGATGTT TAGCTGGTGG GAAGTAGACA GCGAAGGTAA ACGATGGCCG
CTGGCGAATA CGGCCCAACG ACTCTCATTA AGTATTGATA AGGCCAAACC GGTATTCTGG
AAGGAAAATG AGACCCGGCA TATCAGTCTG GAGAACCCGG CCTGGATGTG TAAACAGTTA
AAAAAAGGCA GCCGTATCGT AATGACGATC AGTCCGGCCG CTAATCTTTA CTGGCAAAAG
AACTATGGCG CCGCAAAGGA TGTCAGTCAG CAGACCTTAC TGGACGCTTT AATGCATGAA
ATACACTTCT ACCCGGAATC GCATATAAGC ATTCCCGTGA TGTGA
 
Protein sequence
MRLKPALLIV TCFLLYGSLL SAQQKRYVID STLEIPLKDG TVLSCMLLYQ EGAKLPLPVV 
LRANCYPSKY DTLRAQYVAD SGYAGVFVYN RGKSRSSGSF YPMENDAADN YAAIDWISKQ
SWCNGKIAMY GGSYLGFAQW ATVKKIHPAL KTIVPQVAVG PGIDYPNPGG IFLTYMLQWL
KYVRNNHYLD DATFLDEKKW KQLNTDYLLR GMPFSELDNL EGSGMDTIFQ RWIQHPGNDE
YWQQMTPTQE EFSRINIPIL TTTGYFDDDQ RGAIYYYNMH NKYGPAAGVK EHYLFIGPFD
HAGGQGGKRR NPIPPYEIDT VAMVDQKQLV LDWFNYTLKD GPKPAFLQDR ISVFAMGENK
WHYFPSLEKM NRDTLTYYLP SRQEEAMSIR KRGGKKPLVL SFDAADTVDD TLIIYDGTSS
LVSEAVFKKK YLLTLTTPPL DHDMILNGSI TADLWLSSGT PDADLMFSWW EVDSEGKRWP
LANTAQRLSL SIDKAKPVFW KENETRHISL ENPAWMCKQL KKGSRIVMTI SPAANLYWQK
NYGAAKDVSQ QTLLDALMHE IHFYPESHIS IPVM