| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3634 |
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| Symbol | |
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| ID | 8359801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4562878 |
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| End bp | 4564410 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965803 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003123297 |
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| Protein GI | 256422644 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.358652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.222637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA GATTCGCAAT AATACTGGGT TTTGCTACTG TGCTGGCAAC ATCCGCCTGT
AATAAAGATT TCCTGAATCA GATTGATCCG AATAATCAGC CGGTATCAGA ATACTTCCAG
ACAGAAAACG ATGTACAACT GGCGGTAAAT GGTATATATC AGTCACTGAG AAGCAGCAAT
GCAATCGGTG AAAGCAGCGG ACTCTTTACG GAAGAGCGCT CTGACAATAC CGGTCGTAAC
GATAGCCAGT CCAACGCCGG TGAACCTTTT CAGTTCGGAG ATTTTTCTTT ACTGTCAAGT
AACACCTACC TCAAGTCGCA TTGGGTAGAT ATGTATAAGT GTATTTCCCG GGCGAACCTG
GTACTGACTA ATATCGATAA AGTATCTTTC GCAAACGAGA ACACAAAGAA GGGCTTTGCT
GCGGAAGCGA AATTCCTCCG TGCACTGATC TATTTTCATA TGGTGCGTAA ATGGGGAGAT
GTTCCTTTGG TAACAAAACA GCTGACTACG CTCGAAGAAG TAGATGGTGC TACTTTCCGT
GCAAAAGATA CCGCTGTATA CAGCCAGATC GTAAATGACC TGCTGGATGT GGTGAACAGC
CCGCTGCCTG ATTTCCAGAC CGGCGCAAGC GTAGGCAGAG TATCCAAAGC TGCTGGCAAC
GGGTTACTGG GACAGGTATA CCTGACAATG GCCCTGACGA TTGACAATGG TAAGAAAACT
GAAAACCTGA CCAAAGCAAA ACAATACCTG GACGCTTGTT ACAATATGCG TAAGTTCGGT
CAGCTGAAAG AAATCCCTTA TTCAGACGTA TTCAGCGTAG AGAAGAAATC CTCCTGCCCT
GAACTGATCT TCCAGATCGT GTACAAACAG GGTGATGCGA CTTATTCTTC CAGCATCGCT
GCCAACAACC AGGCAAAAGG TGAAACCGTG AACTCTCAGA AAGTAGCGAC CGGTGTAGGT
GGTAACGTAA CCGGCGATCT GGTGAATGAA TATGAGGCAA ACGATCTCCG TAAAGATTTC
TCTATCAAAT ATGCTAATGC TGATATCGTA AAAGACTGGT TCATCACTAA ATTCCGTGAC
GCCAGCGACG CCGCCGGTAA AAATGGTTAT GGTGGTAATG ACTTTATCCT GATGCGCTAT
GCAGATATTA TCCTGATGCT GGCGGAAGTA AACATGTATC TTGGCGACAA CGGCACTGCA
ATTCAGTACC TGGATATGGT ACGTGCAAGA GCCGGTATGC CTGATTACAA TACATCTATG
CAGAATACCG CGTACAGCAG CAGGTTCTCT TCGCTGAAAC TCGCGATCCT GCATGAGCGC
CGCATTGAAC TGGCTTTCGA AAATCACCGC TGGTACGATC TGTTGCGTAC GTTCTCAACA
GATGAACTTG TGACTTACTT CCATGCGAAA GACCAGACTT ACTTCGGCAT TGCTAAAGTG
GCAAACTTCT CTAAGAAGGA CCGTTATTAC CCGATCCCGT TCGATGAATA TAAGCTGAAT
CCTGAAAAGA TGTATCAGAA TCCGGGATAT TAA
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| Protein sequence | MKNRFAIILG FATVLATSAC NKDFLNQIDP NNQPVSEYFQ TENDVQLAVN GIYQSLRSSN
AIGESSGLFT EERSDNTGRN DSQSNAGEPF QFGDFSLLSS NTYLKSHWVD MYKCISRANL
VLTNIDKVSF ANENTKKGFA AEAKFLRALI YFHMVRKWGD VPLVTKQLTT LEEVDGATFR
AKDTAVYSQI VNDLLDVVNS PLPDFQTGAS VGRVSKAAGN GLLGQVYLTM ALTIDNGKKT
ENLTKAKQYL DACYNMRKFG QLKEIPYSDV FSVEKKSSCP ELIFQIVYKQ GDATYSSSIA
ANNQAKGETV NSQKVATGVG GNVTGDLVNE YEANDLRKDF SIKYANADIV KDWFITKFRD
ASDAAGKNGY GGNDFILMRY ADIILMLAEV NMYLGDNGTA IQYLDMVRAR AGMPDYNTSM
QNTAYSSRFS SLKLAILHER RIELAFENHR WYDLLRTFST DELVTYFHAK DQTYFGIAKV
ANFSKKDRYY PIPFDEYKLN PEKMYQNPGY
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