| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3633 |
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| Symbol | |
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| ID | 8359800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4559334 |
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| End bp | 4562852 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965802 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003123296 |
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| Protein GI | 256422643 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.896331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.266388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC AATTACGCCT TCTTGTCTTA TTTCTTTTCA CTCACCTGAT CAGTTTCGCC
AACGATCTGA ATCATGAGTA CATCACTGTT GCCGTGCGTA ACGCGCGTAT CAGTCTGAAT
GTTAAAGATC AGCCACTAAA GAATGTGTTC GTGCTGATAG AACAAAAAAC AGGTCTCTCC
GTAAATTATA ACGCCAGTGC AGTAAATGGC ATGGAGACTG TTAACTACAA AGCCGACGAT
GTAACGCTGG CAACCGTATT TCAGGTATTG CTGAAGAATT ATCAGGGTAC CGTAAAACAG
GTAGATGAAA ACCACATCTT CCTGAAACTG GAAAAAAGAA GGATCATTGA ACAAGCGGTG
GCGCCTATCA TTGCTGCTGC TGCAACGCCT ATCACCATTA CCGGTACTGT AACGGATGAA
AACAATCAGC CGGTACCTGG TGTCAGCATT CATGAAAAAA TAAGTAAGAG GAATACCACC
ACTGATGTAA ATGGCCGTTA TTCTATTGCC GTTAATACCG GCGATGTACT GGTCTACAAC
TTCATCGGTT ATGCGCCACA GGAAGTGACT GTAGGTGACA AAGCCCTGAT GAACGTACAG
CTGAAAGTAC AGAACAGCCA GTTGAAAGAG ATCGTAGCAA TCGGTTACCA GTCTGTTAGA
AAAAGCGACG TGACTGGTGC AATCTCCAGT GTGAAAGCAA GTGAACTGAA CCTGACCAGC
CCTTCCGTAG GACAGGCCCT GGTAGGTAAA GTAGCTGGTG TACAGATCTC CCAGGTAAGC
GGCGCTCCTT ACGCCAGCAC CAAGATCCGT GTACGTGGTG TGGGTTCCAT CAACGCAAGC
TCCGATCCGC TGTATGTGGT GGATGGTTTT CCGATGGACA ATGACGTGTT CATTAACCCG
GAAGATATTG AGTCTATCGA CATCCTGAAA GATGCGGCTT CTGCTGCGAT CTACGGTTCC
CGTGCTTCGG GTGGTGTGGT ACTGATCACT ACCAAACGTG GTAAAGAAGG GAAAGGTAAG
TTCCAGTATG ACCTGCAAAC CGGTATCAAC CAGCTGGGTA AAAAAGTGAA ACTGCTGAAC
TCAGAAGAGT TTGCACAGCT GATGATCGAT GGTAGAAATA ACTCTTATCA TGACTTCGTG
GTGAACGGTG GTAAAGAATG GAATGATGCG ATGTATTCTG ATGATAATGC TACACGTATC
GCTAAAGTAG GTAACGCAAA CGCAGTGAGT GTTGATCCTA AGTTCTACGA CTTCGCTAAC
CAGAAAGTGA TCAAGCCTCA GTATAACACG GATTGGCAGG ACCTGCTCTA CCGTAACGCG
ATGTTCAGCC GTCATAACCT GTCATTCTCC GGTGGCAGCA AAGAAGTAAA ATACTATATC
AGCGGTGGTT ACCAGAACCA GGATGGTATT ATCTTAAATA CCGGTCTGAA AAAGATCAAC
TTCCGTGCAA ATGTGGACGG ACAGATCAAC CCTAAACTGA AAGCTGGTAT GAACGTTTCG
TATACCAATA ACCAGAATAG GGAAACAGAA GAAGGCCGTT GGGACCACAA CCCGATCATG
GCTGCGCTGC TGATGCTGCC TACTTACCGT GCATATGATG ATAATGGCAA CATTGTAAAG
AATGAAGTAG CTGCACTGTC ATCTACCTAT GGTTATAATA GCTTTGAAAA CCCGCTGGCT
ATCGCGAAGG AAATCAATAT CCGTCGTAAT GGTAACCGCG CTACCTATAA TGGTTATGCT
GTGTACCAGG TATTACCTGA ACTGTCATTG AAAGCAAACC TGGGTATGTC CAGCTATGCA
GAGAAATATG ACTACTATTA TCCGACCAGT CTCAGTAGTG GTGTAAACGC TCCCTATTCT
GATGCGGCAA AAGCTGCGGC AAATGCAAGA GCAAAAAATA CTAATAAACT GGATCAGTTA
GGTGAGTTCA CTGCTGCTTA TAGCAAACAA TTCAACAAAC ATAAACTGGA TGTACTGGGT
GGTTATACCA TACAGAAAAC AACTGGCGAT ATCCTTGAAA TAAGAGCAGA AGGTTTCCAG
GATGACCGTA TCCAGGAAGT AAGTGCGAAA GGTGCTGATG CAGCCTTATT CAAACTGACT
ACTGCTTCTA AATATGTATA CACACTGGTA TCTTACCTGG GTCGTATCAA TTATAACTAC
GATAGCCGTT ATTACCTGAC GGCCTCTTTC CGTACAGATG CTTCTTCCCG TTTTGGTCCG
CAGAACCGTT GGGGTAATTT CCCTTCAGTA GCTGCCGGCT GGAATATCTC TAATGAATCA
TTCTACAATG ACTGGCTGGG ACAGCACTCT ACACTGAAAC TGCGTGCAAG CTGGGGTCTG
AGTGGTAACA ACAACATCGG TAACTACAAC TCCGCTACCG TAATGGGTAC GCCCGCTGGT
GTGCCGTTCG GCAACGGTAC TATCAATACC GGTACTTTCG CAAACGGTAT CAAAGACCCG
AAAATTGGAT GGGAATCTAC TTCCCAGTAC AATGCTGGTC TGGACCTGGG TTTACTCAAC
GGCCGTCTGA ATGTGATTGC CAACTACTAT GTGAGCTATT CTTACAACCT GCTGTTTGAC
AGACCAGTGT CAGCTATCTC CGGCGCGACC ACCGTAACCA CCAACCTGCG TGATTCCAAG
ATCCGTAACA GAGGTATTGA CCTGCAGATC GATGGCCGTG TTATTCAGAC GAAAGAATTC
AACCTGAACT TAACCGGTAA CATCTCTGTA AATCGTAACA AGGTACTGGA TATGGGTGGT
GCGAATACCA TCTTCAAAGC AGGTGCTGAG CGTTCTTACC TGACACACAT CATCCAGACT
GGTCAGCCGG TAGGTATGTT CTACGGTTTC AGAGTACTGG GCGTTGCTAC AGAAGAAAAC
TACAAAAAAG TGGCTCCCTC TGCTTCCAGC ACCAACCCAA TGCACCCTGG CGACCTGTAT
TTCTATGATA AGAATGACGA CGGTGTCGTA AATGATGCAG ATAAAGATGT AATCGGCAGC
CCTTATCCTA AGTTCACTTA TGGCTTTAAC CTGTCCGCTA CTTACAAAGA TTTCTATTTC
TCTTCTTCCT TTAACGGTTC TTATGGCAAT CAGGTACTGG ATGGCCAGGA TTACTACCTG
TATAACATGG AAGGTTCCGG TAACCAATAT GCTGACGTAG CACAACGTTT CCGTTCCAAT
GCACAGCCAG GCGCTGGTAG CGTATACCGT GCTTCCCGTG CAGGTACGCA GAGCAACAGC
ACCCGTCTGT CTACTTTCTA TCTCCAGGAT GGATCTTACT TCAGATGTAC GAACATCATG
CTGGGATATA ATTTCAGATT CCATGCACTG CAACAGAAAC TGGGCGTATC AAAAGCTACC
CTGTTTGCAA GCGTAGACAA CGCCTTCACC ATCACTAAAT ACAAAGGTTA CAATCCGGAA
GTAGACTATG GTAACGGTAG CAACATTGCT CCGGGTGTAG ACTACGGTAT GTACCCACTG
GTACGTGCTT ATAATGCTGG TGTTAAATTG GCCTTTTAA
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| Protein sequence | MKKQLRLLVL FLFTHLISFA NDLNHEYITV AVRNARISLN VKDQPLKNVF VLIEQKTGLS
VNYNASAVNG METVNYKADD VTLATVFQVL LKNYQGTVKQ VDENHIFLKL EKRRIIEQAV
APIIAAAATP ITITGTVTDE NNQPVPGVSI HEKISKRNTT TDVNGRYSIA VNTGDVLVYN
FIGYAPQEVT VGDKALMNVQ LKVQNSQLKE IVAIGYQSVR KSDVTGAISS VKASELNLTS
PSVGQALVGK VAGVQISQVS GAPYASTKIR VRGVGSINAS SDPLYVVDGF PMDNDVFINP
EDIESIDILK DAASAAIYGS RASGGVVLIT TKRGKEGKGK FQYDLQTGIN QLGKKVKLLN
SEEFAQLMID GRNNSYHDFV VNGGKEWNDA MYSDDNATRI AKVGNANAVS VDPKFYDFAN
QKVIKPQYNT DWQDLLYRNA MFSRHNLSFS GGSKEVKYYI SGGYQNQDGI ILNTGLKKIN
FRANVDGQIN PKLKAGMNVS YTNNQNRETE EGRWDHNPIM AALLMLPTYR AYDDNGNIVK
NEVAALSSTY GYNSFENPLA IAKEINIRRN GNRATYNGYA VYQVLPELSL KANLGMSSYA
EKYDYYYPTS LSSGVNAPYS DAAKAAANAR AKNTNKLDQL GEFTAAYSKQ FNKHKLDVLG
GYTIQKTTGD ILEIRAEGFQ DDRIQEVSAK GADAALFKLT TASKYVYTLV SYLGRINYNY
DSRYYLTASF RTDASSRFGP QNRWGNFPSV AAGWNISNES FYNDWLGQHS TLKLRASWGL
SGNNNIGNYN SATVMGTPAG VPFGNGTINT GTFANGIKDP KIGWESTSQY NAGLDLGLLN
GRLNVIANYY VSYSYNLLFD RPVSAISGAT TVTTNLRDSK IRNRGIDLQI DGRVIQTKEF
NLNLTGNISV NRNKVLDMGG ANTIFKAGAE RSYLTHIIQT GQPVGMFYGF RVLGVATEEN
YKKVAPSASS TNPMHPGDLY FYDKNDDGVV NDADKDVIGS PYPKFTYGFN LSATYKDFYF
SSSFNGSYGN QVLDGQDYYL YNMEGSGNQY ADVAQRFRSN AQPGAGSVYR ASRAGTQSNS
TRLSTFYLQD GSYFRCTNIM LGYNFRFHAL QQKLGVSKAT LFASVDNAFT ITKYKGYNPE
VDYGNGSNIA PGVDYGMYPL VRAYNAGVKL AF
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