| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3632 |
|---|
| Symbol | |
|---|
| ID | 8359799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4558351 |
|---|
| End bp | 4559316 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644965801 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_003123295 |
|---|
| Protein GI | 256422642 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.761465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.138815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACAT CATCAGACAA AGCAGAACTA TTCGCGCTTT TAAAAAAATA CAGAGCCGGT
CAATGCACAC CGGAGGAGAT TGCTCAGGTA GAAGCATGGC TCGACAGTTT TGAAGAGCTG
CCCGATAATG ACGCCATGAC AGCCGCCGCC AATGAAGTCG TAGTGAACGT CATGCATTCG
CTCTTCCCGC CGAAAGGCAA ACTCAGATAT ATCTTATATG CTGCGGCAGC ATTGGTGGTA
CTGGCACTTA CCGGTCTGCT ATTCCTGTTC CGTTTCAATA CAAAAACACC GGTTGCGGTA
ACCTATGCTG CCATCTCCAC CGGTAAAGGA GAACGGAAAA ACGTAACACT GCCGGATGGA
AGTCAGCTGA CGCTGAATGC AGCTTCTTCT GTTATCATTC CTTCCGATTT CGGCCAGGAA
CGCAGAGAAC TGACCTTGTC GGGTCAGGGC ACTTTCGATA TCAGACAGAA TATTAAACAG
CCTTTTATAG TGCATACCGG AAGCCTTCGC ACAGTGGTGC TGGGTACCGT ATTTGACATA
AAGGCATATC CCGGGGATGC CGCTTTACAG GTAGCGGTAC TCAGCGGAAA GGTGCGTGTC
GAAAAGCAAC AACAGCAACA TACAGAGATA CTCGCTACTG GTATAGAAAA AGACCAGTTG
CTGACCTATA ATGCTGGTAC AGGCAAACAT GAACTGAAGC CATGTAACGC AGAAGATATT
GCCGGATGGC AACAAAATAA GCTGTTCTTC GATCAGGCAA CTATCGCGGA AATCGCTCAG
GTACTCGAAA GACAATACAA TATACACATC ATGCTCACAG GTACGGCCAG GAGACAATGC
CGCTACACAT TACAGTTAAA GAATGAACCA TTAAACAAGG CCCTGCTACT ATTAGAGCAG
CTGTCAGGAA TCTCTTACCA GGTAAACAAC AATGAAATTA AAATCAACAT TGCGTCATGC
GAATAA
|
|---|
| Protein sequence | MGTSSDKAEL FALLKKYRAG QCTPEEIAQV EAWLDSFEEL PDNDAMTAAA NEVVVNVMHS
LFPPKGKLRY ILYAAAALVV LALTGLLFLF RFNTKTPVAV TYAAISTGKG ERKNVTLPDG
SQLTLNAASS VIIPSDFGQE RRELTLSGQG TFDIRQNIKQ PFIVHTGSLR TVVLGTVFDI
KAYPGDAALQ VAVLSGKVRV EKQQQQHTEI LATGIEKDQL LTYNAGTGKH ELKPCNAEDI
AGWQQNKLFF DQATIAEIAQ VLERQYNIHI MLTGTARRQC RYTLQLKNEP LNKALLLLEQ
LSGISYQVNN NEIKINIASC E
|
|---|
| |