| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3631 |
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| Symbol | |
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| ID | 8359798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4557730 |
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| End bp | 4558335 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644965800 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003123294 |
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| Protein GI | 256422641 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.976343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.127143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGAGA ATCTGACAGA CGCCGAATTA CTATCACTCG CGCAAACTGA CGACGAGAAA
GCATTTGAGG CGATCATGTA TAGATACAAT GTACAGCTGT ATAAATACAT ATATACACGC
ATCCGCAATG AACATGATGC AAAAGATCTT TTGCAGGAGA TATTTATTTC CTGCTGGAAG
AACCGTCATA CGATTAATAA TATCGCCGCA TACCTGAAAC GCTCTGTTCA CTATGCGATC
ATAGACTGGC AGGTCGGTAA TAAAAAAGCC CTGGCCCGTA ATACTACACT TGAAGAAAAA
GACGAACCAA CCACGTATCC TGTAGAGAAT CAACTCATAT CGCTGGAAAT AAAAGAAGAA
GTAGAAACAG AGATCTCAAA GATGAACGAG ACCATGCGTA AGATCTTCGT GTCCAGCAGA
TGGGAATCCA AGTCAATACC CGAAATCGCC CAGGAATACG GCCTCTCCGA GCAAACAGTG
AAAAATAATC TCTCGATGGC ACTTAAACGT ATCCGTCTTC GCCTGGCTGC GTACTTCTTT
ACTTTAGTTT ACATTCTGTT AACATTGAGT TTACAATTCC TTAACGGTAC CACTTTTTAC
TTCTGA
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| Protein sequence | MMENLTDAEL LSLAQTDDEK AFEAIMYRYN VQLYKYIYTR IRNEHDAKDL LQEIFISCWK
NRHTINNIAA YLKRSVHYAI IDWQVGNKKA LARNTTLEEK DEPTTYPVEN QLISLEIKEE
VETEISKMNE TMRKIFVSSR WESKSIPEIA QEYGLSEQTV KNNLSMALKR IRLRLAAYFF
TLVYILLTLS LQFLNGTTFY F
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