Gene Cpin_3629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3629 
Symbol 
ID8359796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4554715 
End bp4556169 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content49% 
IMG OID644965798 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003123292 
Protein GI256422639 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.84733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0253162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACCC CTTATTTTAT GATGGTGGGC GTAGCGTTCG TACTTTTTAC GTCTTGCCGT 
AAAACAGATA CTCCTTATAC TGTGCCACCT GCACAGGAAA ATCCAGAGGA GGTCATTTCA
AAATCAGCTA TCAATGCGTT TGTGCATCAG CAACTGGAAA CCTATGGTTA TTTCGACTGG
AAGATGGCTA GTGATACGAT GGTATGGAGT GCGTTATTAC ATGGAGATAG TATATTATCG
GTGGGTTATA CAACAAATAG TAACGCTGAT GAAGTATTAC AGCTGACAGG TCAGCAGATG
GCTTTACTAC GGCCCGTGCG GACAGCTACG AGTGACAAAT TACATTTTAT GCAACTGCAT
GTCAGCAGTT ATGCGACAGT GAAAGCGCTG CGTTCATCTG CGAAGATCCG TTACGCGGAA
CCGGTCGGAT ATGGTAATTA CATGCGGGAT GTGAATCCGA GGGACGCGGC AGCAGCCTCT
GATATTCTGA CCTCTGGATG CGGCTATAAT AACGCTAAAA CGGACCTTGT TGCCGGTACG
GATTATACGG TCATCTCCCC CGCTGCAAAG CTATCCTGGA ACTATGGTTA CCATCGCATT
GAACAGGCAT GGCAGCGATC AACCGGACAA CGCATAAAGG TCATGATCAT TGATACAGGT
GTCAGTCCGC AGCAGGAAAA TCTCGGCAGC GCCTTTAATC AGGGACTATC CACGGGGAGA
ACCATTCAAA AACTAGGTAC CTACAACAGC AGTCCCGATG ATCCCTGTGG ACATGGCACC
AGTATGGCGG GTGTACTGGC AGGACCAAGG GGTACCGACG GCAATACAGC AGGTATTGCG
TACAACTGCG ACCTGGCGAT CGTACATGCA GCAGAAAACG TGGTACTGCT GTCTACGGCC
GCCATTAACG GTGTTACGTA TGCCTATGTG CAGGGAGCGG ATGACCCAGC AGTGAAAATT
ATCAGCATGA GTATGGGTAC GCTTTTCAGT TCGGGGCAGA TCAAAGACGC CCTGGTCTAT
GCTTATAGTA AGCAGAAACT GATGTTCTGT GCGGCGGGTA CGTCTACTTC TTTCTTTGCC
GGCTTTGTCG GTGTTATATT CCCGGCCAAT CAGCCACAGG TAGTGGCAGT CACCGGTATG
AAAGACAACC TGAAAGACAG GTGTGATAAT TGCCATACCG GCAGCAAAGT GGATTTTGCC
ATTGTCATGC AGAAATCATC CGGCAGGAAT CCGCTCAGTA TTGCGATGAA CGGAGATGCA
CCGTCTACTG TCGGCGGTTC ATCCGTAGCG ACTGCAAGTT GTGCTGCCAT TGCCGCATTG
GTATGGAGTA AATATCCCTC CTATCCGAGG GATAGCATTA TTGCCAGGAT GGCGAGAGCT
TCCGGATTTG CCAACAGCAG AAGCAGTAAA TTCGGTTGGG GTATTATCAA TGCCGATGCA
GCTGTAGGTT ATTGA
 
Protein sequence
MRTPYFMMVG VAFVLFTSCR KTDTPYTVPP AQENPEEVIS KSAINAFVHQ QLETYGYFDW 
KMASDTMVWS ALLHGDSILS VGYTTNSNAD EVLQLTGQQM ALLRPVRTAT SDKLHFMQLH
VSSYATVKAL RSSAKIRYAE PVGYGNYMRD VNPRDAAAAS DILTSGCGYN NAKTDLVAGT
DYTVISPAAK LSWNYGYHRI EQAWQRSTGQ RIKVMIIDTG VSPQQENLGS AFNQGLSTGR
TIQKLGTYNS SPDDPCGHGT SMAGVLAGPR GTDGNTAGIA YNCDLAIVHA AENVVLLSTA
AINGVTYAYV QGADDPAVKI ISMSMGTLFS SGQIKDALVY AYSKQKLMFC AAGTSTSFFA
GFVGVIFPAN QPQVVAVTGM KDNLKDRCDN CHTGSKVDFA IVMQKSSGRN PLSIAMNGDA
PSTVGGSSVA TASCAAIAAL VWSKYPSYPR DSIIARMARA SGFANSRSSK FGWGIINADA
AVGY