Gene Cpin_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3614 
Symbol 
ID8359781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4507680 
End bp4508243 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content48% 
IMG OID644965783 
Productpotassium-transporting ATPase, C subunit 
Protein accessionYP_003123277 
Protein GI256422624 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.263285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000228688 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGT ATATCTGGCC TTCTGTAAAA CTCACCATTT TTATGATACT CGTACTGGCA 
GTACTGTATC CGTCCCTGAT CGCTGCCGTA TCCAAAGCAG CACCGGGACA GGGAAAGGGT
AGAACCATCT CTGTGAATGG GAAAGTAGTG GGCTACGAAA ACGTCGGACA GAAATTCACT
GAAGATAAAT ACTTCAACGG CCGTCCTTCT GCCGTTGACT ACAACGCAGG CGGATCCGGA
GGCTCCAACA AATCCGCTTC CAACCCCGAC TATCAAAAAC TGGTGCAGGA ACGTATTGAT
ACCTTCCTGA TACACAATCC AGGTATCAAT AAGGAAGACA TCCCTGCTGA ACTGGTAACA
GCCTCCGGTA GTGGTCTCGA TCCCGACATC TCTCCTGCAG CTGCGATGAT ACAGGTAAAA
CGCGTGGCAG CTGCACGTCA CCTTTCAGAA AACAGGGTAA TGACCCTCGT ATCTGATCAT
ATCCGCGGCC CATGGCTGGG AATGGCAGGA CCAGCAAAAG TAAACGTACT CAAACTCAAT
ATCGCACTCG ATACATTAAA ATAA
 
Protein sequence
MKKYIWPSVK LTIFMILVLA VLYPSLIAAV SKAAPGQGKG RTISVNGKVV GYENVGQKFT 
EDKYFNGRPS AVDYNAGGSG GSNKSASNPD YQKLVQERID TFLIHNPGIN KEDIPAELVT
ASGSGLDPDI SPAAAMIQVK RVAAARHLSE NRVMTLVSDH IRGPWLGMAG PAKVNVLKLN
IALDTLK