| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3601 |
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| Symbol | |
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| ID | 8359768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4490895 |
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| End bp | 4494167 |
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| Gene Length | 3273 bp |
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| Protein Length | 1090 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965771 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003123265 |
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| Protein GI | 256422612 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000169408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00028286 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCCTTA CTTTGAAAGT CGCATCAGAA ACAACGACGA AGAGATTCTT TTTGACTGTC
TTATTTATTT CTTTATGCCT GCCATTCGCA TATGCCCAGC AGGGTGTCGG TGCATTGAGG
GATGCGATCA CCTGCAATAT GGAACGTGCT ACACTCGATG AAGTATTGCT TGCAATAGGT
AAACAGACAC GTTATTCATT TTCGTATGAT AAACAGGCTG CGGGTAATGT AAGTATCCGT
CACGCAGTCT TCAATAAACA GCCGCTTGGT AAAGTATTGA CGGATCTGCA ACAACAGGCA
ACCCTGGTAT ATGATGTAGA CGACAGACAG ATCGCGGTAA GAATAAGTAC TGCTCCCCGT
CAGCCAGTGG TACAACCTAA ACCAGGATTG GTCAGCGGCC GTGTGATAGA TGAAAAAGGG
GAAATGTTGC CCGGTGCTAC TATTCATATC ATCGAAGTGA ATAAAGGGAT GCAGAGTAGT
GTAGATGGTA CTTATAATAT AGAGATACCT GCGGGTACTT ACACCATGGA AGTACGCTTC
ATCTCTTACC TGAGCCGTCG CATTACAGGC ATCATTGTAA AGGCAGGGGA AAATACCCCC
CTGGATATAT CCATGAAGCC TTCCTCCAAA TCACTGAACG AAGTGGTGAT CACCGCAGAC
TATAGAAAGG CATCCATAGA AGGAATGTTT GCCCGTCAGA AAAGTAGCGC GGCTACGCTG
GATGGCATTG TAAGAGAGCA GATACTGCGT ACACCGGATA ATAATGTGGC CCAGGTGCTG
AATCGTGTAA GCGGACTGAA TGTACAGGAT AACCGCTTTG TGATCGTACG TGGTCTGAGT
GACCGTTATA ATAACGTACA GCTGAATGGC TCACTGTTGC CCAGTACAGA ACCGAATGCC
CGCAACTTTG CATTTGACGT AATACCTAGT GCTCTGATCG ATAATGTGGT AGTATATAAG
ACGGCTACAC CTGATCTGCC GGGAGAGTTC TCGGGCGGGG TAGTAGATAT GACGACAAGA
GATATTCCGG TTGAAAACTT CGTGCGTATC AAGTTGGGTA CCGGTTTCAA TACGAAAACC
ACGGGTAAGG ATTTTTACGG ACCAGAAAGG GGTAAATACG ATTACCTGGG TTTTGATGAC
GGTAGTCGCA AACTGCCTGG TACTTATCAG TCAGGTGAAT ATGCAAAACT GGTGGCAGAA
GGATATTATG GTACCGACAC GGAAAGTCGT AAAAAATACG GTGCTGTCAG TGCCGATTTC
CCGAACAGGT TTACAATGTA TCGTTTTACT GGTAAACCGG TACAGGATTA TGAGCTGAAT
GTCGGAAGGG TAAAACAGCT GAAAGACGGC AGACGTTTCG GAGGCATTTT TGCACTGACC
TACAGGAATC AGCAGACGGC CCAGGATTAT GTTGACCATG CACCCATCGA GATTCACTAT
TATGAGGGAA AGGAATACCT GTTTGACAAT AACCTCAGCG GATTGCTGAA CCTTGGTTAC
TCCTTCGGGA AACATAAGCT GGCCATGAAG AGTATCTTCA CCCAGAAGTT CACGGAAAGG
ACTCGCCTGT ATAAAGGACA AAACCTTTAT TCCGGCACAG ACATCGACGC ATTTTCAAAC
TTCCCTTTGT ATAATACCAT TTTCCAGAGC AAACTGGAAG GTGAGCATAC TATCGGTAAA
AAGGGTTTCC GGTTTAACTG GAACGGAAGT CTTTCCTCTA CTAACCGTAA GGAGCCGGAT
AACAAACGTA TCATGGGTGA GAGAGCGCCG GGAGCGCAAC TCTTCGGTTA TGTATATAAC
GATGCCAACC AGTTACGTAC CAGTACCTAT TATTCCGACC TGAAGGAGCG CCGTTATACC
TGGAGTGCGG AAGGCTTGCA ACCTTTTACC TTAGGTGGGC TACAACAACA GGTAAAGGCC
GGTTATCAGG GTACTTACAG AAAAGCAGAT TTTGAGGCAG AACAGTTCAG TATCAGACCA
GACGCCGGTG CTTCAGATCT GGCAGGTAAA CTGACGGGGC TTCCTTATTA TGAGGTGTAT
GACAAGTCCA ATTTCGGATA TGGTAAGCTG ATATATTTCT CCATGCTGGC ATCGCAGAAC
CAGGAACGCG GACGTGCAAA CGGGTATAAT GCTTATCAGC GTTTACATGC AGGTTACCTG
ATGCTGGACG GACATTTTAC GAAACAGTTA CGATTTGCGG GCGGTTTGCG CGTGGAAAAG
AACTATATGA ACTCCCTCAC TTTGGATACC AGGGCAAAAG GAGATGGCAC GATCACACTT
TCCGATACTG TTGTAACGAT TGATAAAACA GACTGGTTGC CCTCCGTCAA CCTGATCTAT
GAGATCACGC CTAAATTCAA TGTGAGAGCA TCTTATTATC ACTCTGTAGC AAGACCTGAC
CTGAGAGAAC TGTCTTTCTT TGAATATTAT AAACCGGAGG AAGATACCTG GGTGAGTGGT
GATAACCTGA GACCAACTGC TATCAGGAAC GTGGATCTTC GTATAGAGTT TTATCCTTCT
CCGCAGGAGC TGATATCCTT CTCTGCCTTT TATAAGAAAT TCAGGGATCC GATAGAACTG
CAGCTGGAAG CAGCCATGAT ACCCGCGCAC GTATTGACGA TGCAGTATGT GAACATGAAA
TCGGCAACCG ATCTGGGTTT TGAATTCAAC TTCCGTAAGT CAGCAGGGTT CATCAATGAA
ACCTCTGAAT TTCTGAAAAA TCTTTACCTC TCCGGTAACT TCTCTTATCT CAATGCCAAG
GTAGAGTATG ACGCGGAAGT AAGAATTCGT ATTGATGATA ATAAGGAGAT CATACAGCCA
GCAAGACGTA ACCGTCCGCT GTTTGGTCAG GCGCCTTACA TCATCAACGG CGGTGTGATA
TATACAGGCA AACATATAGG TTTTAATGCA GTATACAACA GGGTGGGAGA GCGTATCATC
TTTGGTTCTG AGCTGGATGA ATATAATGAA TATGAGAAAG CCAGGGATGT GGTGGATTTA
CAGCTGAATT ACCGCTTTAT GAAGAATAAC AAGGCTGAGA TCAAATTGAA TGCGGCTGAT
CTGCTGAACC AGCCGGTGAT CAGATACTAT AATAACCACA AAAATATATG GAAACCCAAT
GCCTCGGGAG TGCCAGGGGA GTTTGATCAG TATGGAAACC TTATTATTCC AAACGATCCC
AGCGGGAAAA AGTATGACAG CCGGTATGAT GAGCTGAGAC GTAAGTTCTG GTATGGCAGA
AACTTTACGA TCAGCGCCAG CTATACTTTC TGA
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| Protein sequence | MFLTLKVASE TTTKRFFLTV LFISLCLPFA YAQQGVGALR DAITCNMERA TLDEVLLAIG
KQTRYSFSYD KQAAGNVSIR HAVFNKQPLG KVLTDLQQQA TLVYDVDDRQ IAVRISTAPR
QPVVQPKPGL VSGRVIDEKG EMLPGATIHI IEVNKGMQSS VDGTYNIEIP AGTYTMEVRF
ISYLSRRITG IIVKAGENTP LDISMKPSSK SLNEVVITAD YRKASIEGMF ARQKSSAATL
DGIVREQILR TPDNNVAQVL NRVSGLNVQD NRFVIVRGLS DRYNNVQLNG SLLPSTEPNA
RNFAFDVIPS ALIDNVVVYK TATPDLPGEF SGGVVDMTTR DIPVENFVRI KLGTGFNTKT
TGKDFYGPER GKYDYLGFDD GSRKLPGTYQ SGEYAKLVAE GYYGTDTESR KKYGAVSADF
PNRFTMYRFT GKPVQDYELN VGRVKQLKDG RRFGGIFALT YRNQQTAQDY VDHAPIEIHY
YEGKEYLFDN NLSGLLNLGY SFGKHKLAMK SIFTQKFTER TRLYKGQNLY SGTDIDAFSN
FPLYNTIFQS KLEGEHTIGK KGFRFNWNGS LSSTNRKEPD NKRIMGERAP GAQLFGYVYN
DANQLRTSTY YSDLKERRYT WSAEGLQPFT LGGLQQQVKA GYQGTYRKAD FEAEQFSIRP
DAGASDLAGK LTGLPYYEVY DKSNFGYGKL IYFSMLASQN QERGRANGYN AYQRLHAGYL
MLDGHFTKQL RFAGGLRVEK NYMNSLTLDT RAKGDGTITL SDTVVTIDKT DWLPSVNLIY
EITPKFNVRA SYYHSVARPD LRELSFFEYY KPEEDTWVSG DNLRPTAIRN VDLRIEFYPS
PQELISFSAF YKKFRDPIEL QLEAAMIPAH VLTMQYVNMK SATDLGFEFN FRKSAGFINE
TSEFLKNLYL SGNFSYLNAK VEYDAEVRIR IDDNKEIIQP ARRNRPLFGQ APYIINGGVI
YTGKHIGFNA VYNRVGERII FGSELDEYNE YEKARDVVDL QLNYRFMKNN KAEIKLNAAD
LLNQPVIRYY NNHKNIWKPN ASGVPGEFDQ YGNLIIPNDP SGKKYDSRYD ELRRKFWYGR
NFTISASYTF
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