| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3593 |
|---|
| Symbol | |
|---|
| ID | 8359760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4479873 |
|---|
| End bp | 4480940 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644965763 |
|---|
| Product | Aldose 1-epimerase |
|---|
| Protein accession | YP_003123257 |
|---|
| Protein GI | 256422604 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2017] Galactose mutarotase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00379165 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000198106 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA TACAACACCA GGCACTCTCC GCTACCCGCG TCATTTATGG CGAGACTGGC
GGAGAGCCGC TTGAACAGAT TACGCTGGAG AATGCAGCCA TCCGTATAGA ACTCATTAAC
CTGGGCGCTA CTATCACTGC AATCTACGCC CCCGACAAAG CGGGTGTCCG TAAAAACATC
GTAGCAGGTT ATACTAATCT GCAAGCCTAC TGGCAGAACC CGGCTTACTT TGGTGCTACT
GTTGGTCGTT ATGCCAACAG GATAGCCGGC GGTAAACTAT CCATTAACGG TGTCAACTAC
CAGTTACCAG TCAACAATGA CAACAACCAT CTGCATGGTG GTTTTGACGG ATTTCACAGG
AAAGTCTGGC AGGTGATACA ATGCAGTGAG AGCGAAGAAC AGGCCAGCAT CACCCTGGCT
TATACAAGTC CTGACGGAGA AGAAGGTTAT CCTGGAACAC TCCGTGTCCA GGTCCGCTAT
ATACTCGACC GGCATAACCG TCTGACCATC ACATATACTG CCAGCACTGA TAAAGCAACG
CCGGTAAGTC TGACAAACCA CTCTTACTTC AACCTGACTG GTTTTGATAA TCCGCTCGTA
ACAAATCACC AGCTTCGTAT CAATTCAGAC AATTACACGG AAAAAAACAG CAGCAACACC
CCTACCGGTC AACTGCTTCC CGTAGCAGGA ACAGCGCTTG ATTTCACGAA TGCCCGTCCG
GTAGGTCAGT GTATTGACCA ACTCCCGGCG GACATGGGTT TTGATCATAA CTATGTGCTA
CGCCCCTATA ATACGGAGAA CATTCCTGCC GCAGAACTGG AAGATCCGGA AAGTGGTCGC
GTACTCCGTG TATTCACCGA CCAACCCGGT ATACAGCTTT ACAGTGCAAA CTATTGGGAC
GGTAGTATCA CTGGCGCACA GGGCGTACCT TATCTCAAAC ATGGCGCTGT AGCACTTGAG
ACGCAGGCAT TTCCTGACAG TCCGAATCAT GCGCAGTTTC CCGAAACGAT CCTCCGCCCC
GGAGAAACTT ACCGGCGGAA AACGGTCTTC GTTTTTGATG TGCAATAA
|
|---|
| Protein sequence | MLNIQHQALS ATRVIYGETG GEPLEQITLE NAAIRIELIN LGATITAIYA PDKAGVRKNI
VAGYTNLQAY WQNPAYFGAT VGRYANRIAG GKLSINGVNY QLPVNNDNNH LHGGFDGFHR
KVWQVIQCSE SEEQASITLA YTSPDGEEGY PGTLRVQVRY ILDRHNRLTI TYTASTDKAT
PVSLTNHSYF NLTGFDNPLV TNHQLRINSD NYTEKNSSNT PTGQLLPVAG TALDFTNARP
VGQCIDQLPA DMGFDHNYVL RPYNTENIPA AELEDPESGR VLRVFTDQPG IQLYSANYWD
GSITGAQGVP YLKHGAVALE TQAFPDSPNH AQFPETILRP GETYRRKTVF VFDVQ
|
|---|
| |