| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3592 |
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| Symbol | |
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| ID | 8359759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4478508 |
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| End bp | 4479836 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965762 |
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| Product | sugar transporter |
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| Protein accession | YP_003123256 |
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| Protein GI | 256422603 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0369851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000823269 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAT CATCATTCAA CAGCTCCTAC GTACTGGGTA TTTCCTTTAT TTCTGCCCTG
GGAGGCTATT TATTTGGCTT TGACTTCGCT GTGATCGCGG GAGCTTTGCC TTTTCTGCAG
CAACAGTTTG GTCTGGATGC CTATTGGGAA GGATTTGCGA CGGGTAGTCT GGCCTTAGGG
GCGATCGTCG GCTGTATCAT TGCCGGCACA ATGGCGGACA AATACGGCCG TAAAAAGGGC
CTTTTAGTGG CTTCTGCCAT CTTTGGTATC TCTTCTCTGG CAATGGCGAT TGCGCCTGAC
AGGAATATCT TTATTGCTTT CCGTTTCGTA GCAGGTATTG GCGTTGGCAT GGCATCTATG
CTGTCGCCGA TGTACATTGC TGAAGTAGCA CCGGCACATC TCCGCGGACG CATGGTTGCG
ATTAATCAGC TGACGATCGT TACCGGTATC CTGGTGACTA ACATCATCAA TTATGGGCTG
CGCAATCATG GTGATGATGC ATGGCGGTGG ATGTTTGGTC TTGGCCTCTT ACCTTCCCTG
CTCTTCTTTC TGGGCGCTTT ATGGTTACCG GAGAGTCCGC GTTGGCTGGT AAAATCCGGA
CGTTCAGCAG AAGCGCGGAT TGTATTGCAC CGTATTGGTG GCGATGACTT TGCAGCGGAA
TCTTTGTCTG TTATTCAAAA TTCTATGACG GGTAATGAGC GGGTGAGCTA TGGACATATC
TTCCGGAAGG CAGTATTGCC GGCGGTGGTG GTCGGTATTA TACTGGCGAT CTTCCAGCAA
TTTTGTGGTA TCAACGTGGT GTTTAACTAT ACGCCGAGGA TCTTTAAAAG CATTGGGGTG
TCGCAGGATG GACAGCTTTT ACAGACAGTC TTTATCGGAG GCGTTAATCT GGTCTTTACA
ATTCTGGCAA TGTTGCTGGT AGATAAACTG GGCCGGAAGC CGCTGATGTT AATTGGCGCC
GGAGGTTTGA CGGTGTTGTA TATTGTTGTT GTGCGGATGT TGTCGGCGGG ATCTGAGCAT
GTGTCCTGGT ATTTGCTGGC GGCTATTGGT ACTTATGCGA TGTCCCTGGC GCCGGTGACC
TGGGTGTTGA TTGCGGAGAT CTTTCCGAAT AAGATCAGGA GTGCAGCGAC TTCGTTTGCG
GTGTTATGTT TGTGGGCGGC GTACTTTGTG TTGGTGTTTA CTTTCCCGAT GTTGTTTGAT
AAGCTGAAGG ATGGGACATT TTATATTTAT GCGGCGGTGT GTTTAGCGGG GTTTGTGTTT
ATATGGCGGA ATGTGCGGGA AACGAAAGGG AAGACCTTGG AAGAATTAGA GGGTGTAATG
ATGCATTAA
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| Protein sequence | MKQSSFNSSY VLGISFISAL GGYLFGFDFA VIAGALPFLQ QQFGLDAYWE GFATGSLALG
AIVGCIIAGT MADKYGRKKG LLVASAIFGI SSLAMAIAPD RNIFIAFRFV AGIGVGMASM
LSPMYIAEVA PAHLRGRMVA INQLTIVTGI LVTNIINYGL RNHGDDAWRW MFGLGLLPSL
LFFLGALWLP ESPRWLVKSG RSAEARIVLH RIGGDDFAAE SLSVIQNSMT GNERVSYGHI
FRKAVLPAVV VGIILAIFQQ FCGINVVFNY TPRIFKSIGV SQDGQLLQTV FIGGVNLVFT
ILAMLLVDKL GRKPLMLIGA GGLTVLYIVV VRMLSAGSEH VSWYLLAAIG TYAMSLAPVT
WVLIAEIFPN KIRSAATSFA VLCLWAAYFV LVFTFPMLFD KLKDGTFYIY AAVCLAGFVF
IWRNVRETKG KTLEELEGVM MH
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