| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3575 |
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| Symbol | |
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| ID | 8359742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4453693 |
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| End bp | 4454832 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965745 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003123239 |
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| Protein GI | 256422586 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0183852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.158176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG ATGTATTAAT TCGGAGCATG CTTGTCCTGA CAGTCCTCGT AGGCCTGTAC
AGCTGTAAGT CTTCTTCTGC GCACAACGAA GCCCCCGCTG CTACACCGGC AGAAGTGGTA
ACGATTGGCG CAGCTGATAC GAACACTGAA AACGACTATA CAGCATCACT GGAAGGAAAG
GTAAATGTAG AGATCCGTTC ACAGGTAGAT GGTTACCTGG AAAAAGTATA TGTAGATGAA
GGCGCTTATG TGAAAGCAGG TCAACCTTTA TTTAAAATAG ACGAACACCG CTATCGCGAA
CAGCTCAACA ATGCCAAAGC AGCTTTACAC GCAGCAGAAG CATCTGTGTT GAACGCTCAG
CTGGAAATAG ACAAAGTAAC GCCACTGGTA AATAACAAGG TGGTGTCCGA CATGCAGCTG
CGTACTGCTA AAACTGCGCA TGAAGTGGCT ACAGCTAATG TAGAGCAGGC GAAGGCAATG
GTTGCTTCTG CAGCTATCAA CCTGGGTTAC ACGAATATCA CTGCCCCTGT GAGTGGTTAT
ATTGGTCGTA TTCCAAAGAA AGCCGGTGCA CTGATCTCTC TGAACGATCC GGAAGCACTG
ACCAAACTTT CTGATGTACA TGAGATCTAC GCTTATTTTT CTCTGAGTGA AGGCGATTTC
TTCAGCTTCA AAGACAACTA CGATGGTTCT ACGCTGGAAG AGAAGCTTAA AAATCTGCCG
CCGGCAATAT TGGTACTGGC TGACAATCAT GTCTATGAAG AAAAAGGTAA AGTAGATATG
ATCGACGGAC AGTTTGAGAA GAACACAGGC GCTATCACAC TGCGTGCTGT ATTCCCTAAC
GCCAAAGGCA CTATCCGTAC AGGTAACACC GGTAAAGTAA GATTACTGCG TGAACATAAA
GCAGCGATCA TCGTACCACA GGCAGCTACT ATCGAAATAC AGGACAGGAT TTTCGTATAC
ACGTTAGACA AGGATAACAA AACTGTTCGT CAGGCAATCA CCGTGATCGG TTCCACTGGC
AATCAGTACC TGGTAAGTGA TGGTGTAAAA TCCGGAGACA GAATCGTTGT ATCTGGTGTT
GACCGTCTGA AAGAAGGTAT GGAAATCAAA CCGGAGAAGG CTAAGCCAGC ACAGAACTGA
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| Protein sequence | MKKDVLIRSM LVLTVLVGLY SCKSSSAHNE APAATPAEVV TIGAADTNTE NDYTASLEGK
VNVEIRSQVD GYLEKVYVDE GAYVKAGQPL FKIDEHRYRE QLNNAKAALH AAEASVLNAQ
LEIDKVTPLV NNKVVSDMQL RTAKTAHEVA TANVEQAKAM VASAAINLGY TNITAPVSGY
IGRIPKKAGA LISLNDPEAL TKLSDVHEIY AYFSLSEGDF FSFKDNYDGS TLEEKLKNLP
PAILVLADNH VYEEKGKVDM IDGQFEKNTG AITLRAVFPN AKGTIRTGNT GKVRLLREHK
AAIIVPQAAT IEIQDRIFVY TLDKDNKTVR QAITVIGSTG NQYLVSDGVK SGDRIVVSGV
DRLKEGMEIK PEKAKPAQN
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