Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3571 |
Symbol | |
ID | 8359738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4450195 |
End bp | 4451004 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644965741 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003123235 |
Protein GI | 256422582 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0312904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0352472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATATC AGTCCATACA ACCAGATAGT TTGCTCCGGG AACAGGTAGG CCGGTTCTGG GTCACGGAAG GACAAATACC TGCCGGCCAA TCCATGACAT TCCGGTCCAT GGTAGACGCC TATCCGGGTA TGATATTCCT GGAAGATCCT GCCGCCTTTT TCCCCGACCA TACAACCGCT AAAAAACCAC ATATCTTCCT GCATGGCGCC AGCACCTTCT GCTTTGAAAA AAAGCTGACA GGCAAGGTAA AAATCATCAG TGTACACTTC CGCCCTACCG CTATCTGCTC CCTATTCGGC ATAGCAGGTC ACGAACTGGC CAATAACGTG ACCGACCTGG ATAGTGTCTG TAAAAATCAC CTGAGCGAAC AACTACTCAA TGCGACAGGT ACAGCCGAAA GAATTGCCCT GCTGAATAAT TTCCTGAAGG AGCAATGGCG GCAACATCAA GCTGTAAATA CTGCAAAAAC ACAATACGCC ATACAGCTTC TACAGCAAGG CGATACGACG GTTTCATTGC GGCTGTTACA ACAGCAACTA CATATTACAG AACGTTCGCT CGAACGCCTG TTCAGGGACC AGATCGGTCT TTCCCCTAAA CTGATCGCCC GCATTACCCG CTTCCAGAAA GCAGTCAATG CACTAAGTCA TCCGGATACG GAAAGTCTGG CAGCGATTGC CTACAAATAT GACTACGCCG ACCAATCGCA TTTCATCCGC GAATTCAAAA CGTTTTCAGG TACTACCCCA CAGCAATTCC GGCAACAGGC AGGGGCCGGC GTAGAGAACT TCGTAGAGTG GAACGACTAA
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Protein sequence | MQYQSIQPDS LLREQVGRFW VTEGQIPAGQ SMTFRSMVDA YPGMIFLEDP AAFFPDHTTA KKPHIFLHGA STFCFEKKLT GKVKIISVHF RPTAICSLFG IAGHELANNV TDLDSVCKNH LSEQLLNATG TAERIALLNN FLKEQWRQHQ AVNTAKTQYA IQLLQQGDTT VSLRLLQQQL HITERSLERL FRDQIGLSPK LIARITRFQK AVNALSHPDT ESLAAIAYKY DYADQSHFIR EFKTFSGTTP QQFRQQAGAG VENFVEWND
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