| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3570 |
|---|
| Symbol | |
|---|
| ID | 8359737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4448866 |
|---|
| End bp | 4450125 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644965740 |
|---|
| Product | glycosyltransferase, MGT family |
|---|
| Protein accession | YP_003123234 |
|---|
| Protein GI | 256422581 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR01426] glycosyltransferase, MGT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0172667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0986761 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG TATTATTGCT GAGCATTCCT TCTCATGGAC ATATGAATCC GACACTGGGA
CTTGCAGGCG CACTGGTAAA ACACGGAGAA GAAGTAACCT TTTTCAGTTC GGAAGAATTC
AGGAAACCGG TAGAAGCTAC CGGCGCCACC TTTATCTGTT ATAAAGACGA CCTTAATATC
TTCAAATTCT CACAAGGACA GGCAGCGACA GCCTCAGGTA AGAAAAAACC TGCCGGTAAA
CCCGGCTTTA TTAATGCACT GTTACAACCC GAACGTTTCG TAGATCATCT CATGGAACAG
ATCAAAGGGA TGCAGTTTGA TTATATCGTC CATTCTGCCG CTTATCCTTA TGCGAGTGTC
ATCGCACAGG CATTGAAAAT ACCGGCGGTA TCTTCTTTCG CTGTATTTGC TACCATGAAG
GATTTTGAAA AGATGCGGAA AGGGAAAACC TGGAGCCTCG CCAACCTGGT TCCCTTCAGA
TGGAAACTCC GTTTCTTATA CCTGCTCTTC TACCGTAACA AGTTTGGTAA AGTACGCAGG
TATTTACAGG ACAAATACAA GGTGCAGGTA TCTAGCGATC TGCTGAGTCA TTTCTTCAAT
AAAAGCGAAT TGAATATCAT CTATACCTCC CGTTATTTTA TACGGGACAA CAGTCATTAT
GATGACAGCT TTGTTTTCGT GGGCGCACCG GTATATGAGA AAAAATACCA GGTGGATTTT
CCTTTTGAAA AGCTGGAAGG AAAAAAGGTA TTATATATTT CCCTGGGGAC GGTCTTTGGT
AATTACGCAG CCGGCGTATA TGATCACTTT TTTAAAGCAT TCGCCGAGAT GGATATCACG
GTGGTCATGA CGGCCTACGG CGTCGACCTG TCTGCCATGA AAATACCTGC TAATTTCATT
CTACGGGATT ATGTACCGCA ATCCGCCATC CTCGAACGGA GTGCGGCTGC TATTACACAT
GCGGGTATGA ACAGTATTGG CGATCTCTTG TATGCCAATG TGCCGTTTGT GTCCATTCCC
ATGGGGGCAG ATCAGTTTTT CCTGGCGGAA AGAGCAGCCG AACTGGGCGC AACGATTGTA
CTCGACGTTC ATACCCTTAC ACCGGAGGGA CTGAGAGCGG CAACAGAGAA AGTCATGACG
GATAAAAGTT TTATCGTGAG TAGCCGTAAG ATCAGTGATT CTTTCCGGGA AGCAGGCGGG
TATGAAAAGG CGGTGGAAGA GATCTTTAGC TGGAAGAAAA CAAAAGGAAT CAGACGATAA
|
|---|
| Protein sequence | MAKVLLLSIP SHGHMNPTLG LAGALVKHGE EVTFFSSEEF RKPVEATGAT FICYKDDLNI
FKFSQGQAAT ASGKKKPAGK PGFINALLQP ERFVDHLMEQ IKGMQFDYIV HSAAYPYASV
IAQALKIPAV SSFAVFATMK DFEKMRKGKT WSLANLVPFR WKLRFLYLLF YRNKFGKVRR
YLQDKYKVQV SSDLLSHFFN KSELNIIYTS RYFIRDNSHY DDSFVFVGAP VYEKKYQVDF
PFEKLEGKKV LYISLGTVFG NYAAGVYDHF FKAFAEMDIT VVMTAYGVDL SAMKIPANFI
LRDYVPQSAI LERSAAAITH AGMNSIGDLL YANVPFVSIP MGADQFFLAE RAAELGATIV
LDVHTLTPEG LRAATEKVMT DKSFIVSSRK ISDSFREAGG YEKAVEEIFS WKKTKGIRR
|
|---|
| |